Homer de novo Motif Results (08-homer/GerminatingvsDry_up/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 83
Total background sequences = 45840
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G 1e-9-2.242e+0112.05%0.64%28.9bp (34.4bp)MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer(0.780)
More Information | Similar Motifs Found
motif file (matrix)
2 * C A G T C G T A A T G C C A G T A G C T A C T G A G T C C T G A C G T A A G T C 1e-7-1.834e+019.64%0.50%14.7bp (34.9bp)byn/dmmpmm(Pollard)/fly(0.739)
More Information | Similar Motifs Found
motif file (matrix)
3 * A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A 1e-7-1.770e+014.82%0.03%27.6bp (20.7bp)MLXIPL/MA0664.1/Jaspar(0.707)
More Information | Similar Motifs Found
motif file (matrix)
4 * G C A T G T C A A C G T C G A T C G A T C T G A A G C T T G C A A G C T C G T A G A C T G T C A 1e-7-1.683e+0112.05%1.16%17.0bp (39.6bp)nub/dmmpmm(Noyes)/fly(0.813)
More Information | Similar Motifs Found
motif file (matrix)
5 * A G T C C G T A A C G T C T G A C A T G C G T A A G T C A G T C C G T A C G T A 1e-7-1.662e+017.23%0.24%10.3bp (26.9bp)HAP2/MA0313.1/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T A C G T A C G T C G T A C G A T C G A T G T C A A G C T A G T C A T C G C G T A C G A T 1e-7-1.638e+0110.84%0.91%30.4bp (32.2bp)PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer(0.775)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T 1e-6-1.524e+0121.69%5.23%29.2bp (30.9bp)SRSF10(RRM)/Homo_sapiens-RNCMPT00088-PBM/HughesRNA(0.892)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T 1e-4-1.131e+0120.48%6.23%25.6bp (36.7bp)MOT2/MA0379.1/Jaspar(0.811)
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motif file (matrix)
9 * C T A G G T A C G T C A C G T A A T G C A C G T A C G T A C T G 1e-3-8.537e+0015.66%4.90%24.8bp (31.7bp)bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer(0.985)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A A G T C 1e-2-6.317e+001.20%0.00%0.0bp (0.0bp)slp1/dmmpmm(Papatsenko)/fly(0.792)
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motif file (matrix)
11 * A G T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A 1e-2-6.317e+001.20%0.00%0.0bp (0.0bp)LARK(RRM,Znf)/Drosophila_melanogaster-RNCMPT00124-PBM/HughesRNA(0.891)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C T G A C T G 1e-2-5.625e+001.20%0.01%0.0bp (30.6bp)toy/dmmpmm(Pollard)/fly(0.764)
More Information | Similar Motifs Found
motif file (matrix)