Information for 1-AGAGAGGT (Motif 7)

C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
Reverse Opposite:
G T C A A G T C T A G C C G A T A G T C C G A T A G T C A C G T
p-value:1e-6
log p-value:-1.524e+01
Information Content per bp:1.812
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif21.69%
Number of Background Sequences with motif2404.4
Percentage of Background Sequences with motif5.23%
Average Position of motif in Targets49.3 +/- 29.2bp
Average Position of motif in Background50.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRSF10(RRM)/Homo_sapiens-RNCMPT00088-PBM/HughesRNA

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AGAGAGGT
AGAGAGG-
 C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
G T C A C T A G C T G A C T A G C T G A T C A G T C A G A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00089-PBM/HughesRNA

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AGAGAGGT
AGAGAAA-
 C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
C G T A C T A G C G T A C T A G C T G A T C G A T C G A A C G T

RNP4F(RRM)/Drosophila_melanogaster-RNCMPT00060-PBM/HughesRNA

Match Rank:3
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AGAGAGGT
AGAGAAG-
 C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
C G T A A C T G C G T A A C T G C T G A C T G A C T A G A C G T

Trl/MA0205.2/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AGAGAGGT-
GAAAGAGAGAGA
 A C G T A C G T A C G T C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T A C G T
T C A G T C G A T C G A G C T A C A T G C G T A A T C G T G C A C T A G T G C A T C A G T C G A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGGT
RHHCAGAGAGGB
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

SRSF10(RRM)/Homo_sapiens-RNCMPT00090-PBM/HughesRNA

Match Rank:6
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AGAGAGGT
AGAGAAA-
 C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
C G T A A C T G C G T A C T A G C G T A T G C A T G C A A C G T

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:7
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGGT
RGAGAGAG--
 A C G T A C G T C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
C T A G T C A G C T G A T C A G T G C A A C T G T C G A T C A G A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00019-PBM/HughesRNA

Match Rank:8
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGAGAGGT
AGAGAAA-
 C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
C G T A C T A G C G T A C T A G G T C A T G C A T G C A A C G T

Trl/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGGT-
GAGAGAGCAA
 A C G T C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T A C G T
T C A G T C G A A T C G G C T A A C T G G T C A T C A G G T A C T C G A T C G A

BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGGT
GARGAGAGAGAA
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C T A G C G T A A T C G T C A G A C G T
C A T G G C T A C T A G T A C G C G T A T C A G C G T A A C T G C G T A C A T G C T G A C G T A