Information for 3-TATTATAT (Motif 8)

A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T
Reverse Opposite:
C G T A C G A T C T G A A C G T T C G A G T C A C G A T T G C A
p-value:1e-4
log p-value:-1.131e+01
Information Content per bp:1.816
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif20.48%
Number of Background Sequences with motif2860.1
Percentage of Background Sequences with motif6.23%
Average Position of motif in Targets48.7 +/- 25.6bp
Average Position of motif in Background50.0 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MOT2/MA0379.1/Jaspar

Match Rank:1
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:TATTATAT
---TATAT
 A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G A T

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TATTATAT-
--NTATATA
 A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T A C G T
A C G T A C G T T A G C C G A T C G T A A C G T C G T A A C G T C G T A

MEX-5(Znf)/Caenorhabditis_elegans-RNCMPT00039-PBM/HughesRNA

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TATTATAT
NTTATTAT--
 A C G T A C G T A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T
G C T A C G A T A C G T C G T A A C G T A C G T C G T A C G A T A C G T A C G T

Tb_0219(RRM)/Trypanosoma_brucei-RNCMPT00219-PBM/HughesRNA

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TATTATAT
NAGTATAT
 A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T
A G C T G C T A A C T G A C G T C G T A A C G T C G T A C G A T

NHP6A/MA0345.1/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TATTATAT---------
NNATNNTTATATATAGNNNAN
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G A T C C G T A G C A T C G A T G C A T G C A T G C A T C G T A G C A T C G T A G C A T C G T A C A G T C G T A C T A G C A T G C G A T G T A C C G T A A C G T

QKR58E-1(KH)/Drosophila_melanogaster-RNCMPT00142-PBM/HughesRNA

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TATTATAT
TTATTAT--
 A C G T A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T
A C G T C G A T C G T A A C G T A C G T C G T A A C G T A C G T A C G T

Antp/dmmpmm(Down)/fly

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TATTATAT--
ATTATTATTTAT
 A C G T A C G T A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T A C G T A C G T
G C T A G C A T C A G T C G T A A C G T A C G T C G T A G C A T C G A T C G A T C G T A G C A T

AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TATTATAT-----
TATAHTATATAGTTT
 A C G T A C G T A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A A C G T C G T A G C T A G C A T T G C A A G C T C G T A G C A T C T G A T C A G A C G T G C A T C G A T

RBMS1(RRM)/Homo_sapiens-RNCMPT00152-PBM/HughesRNA

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TATTATAT-
--GTATATA
 A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T A C G T
A C G T A C G T A T C G A C G T T G C A A C G T C G T A A C G T G T C A

PHO2/MA0356.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATTATAT
TATTAT--
 A C G T G C T A A C G T A C G T C G T A G A C T C G T A A C G T
C G A T C G T A C G A T A C G T C G T A G C A T A C G T A C G T