Information for 1-CACGTGTGTATG (Motif 1)

A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
Reverse Opposite:
G A T C C T G A C A G T C T G A G A T C C G T A G T A C C T G A A G T C C A T G A C G T T C A G
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.678
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif12.05%
Number of Background Sequences with motif294.6
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets51.8 +/- 28.9bp
Average Position of motif in Background49.2 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CACGTGTGTATG
CACGTGTGCH--
 A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CACGTGTGTATG
GGCACGTGTC----
 A C G T A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T A C G T

At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CACGTGTGTATG
NNNCACGTGNNNNNN
 A C G T A C G T A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
C G A T A G T C C T G A G A T C C G T A G A T C C T A G G A C T C T A G G A C T T C A G G C T A G C T A G C A T G C T A

At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CACGTGTGTATG
NNNNCACGTGNNNNN-
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
C G A T G C A T A G T C T C A G G A T C C G T A G A T C C T A G G C A T C T A G A G C T T C G A C G T A G C T A G C A T A C G T

OJ1058_F05.8/MA1033.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGTGTATG
ACACGTGT-----
 A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
G T A C A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CACGTGTGTATG
GCACGTGT-----
 A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T

ABF3/MA0930.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CACGTGTGTATG
ACACGTGT-----
 A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGTGTATG
AACACGTGTT----
 A C G T A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T

BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CACGTGTGTATG
NWSACACGTGTSWNN-
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
G C A T G C A T A T G C C T G A G A T C C T G A G A T C C T A G G A C T C T A G G A C T T A C G C G T A C T G A C G T A A C G T

ABF2/MA0941.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGTGTATG
NNCACGTGTCNNN-
 A C G T A C G T A G T C C G T A G T A C C T A G A G C T C A T G C G A T C T A G G A C T G T C A A G C T C T A G
C G T A G T C A A G T C C G T A A G T C C T A G A C G T C T A G A C G T G A T C C T G A A C G T A C T G A C G T