Information for 2-CACGTGWTGYAA (Motif 3)

A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
Reverse Opposite:
A C G T G A C T C T G A A T G C C G T A C G A T T A G C C G T A A G T C C A T G A G C T A C T G
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.760
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif15.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.8 +/- 27.6bp
Average Position of motif in Background61.2 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MLXIPL/MA0664.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGWTGYAA
ATCACGTGAT----
 A C G T A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CACGTGWTGYAA
ATCACGTGAT----
 A C G T A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T A C G T

TFE3/MA0831.2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CACGTGWTGYAA
CACGTGAC----
 A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGWTGYAA
AACACGTGTT----
 A C G T A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACGTGWTGYAA
CACGTGNT----
 A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACGTGWTGYAA
WNBCACGTGA-----
 A C G T A C G T A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
C G A T A C T G A G C T T G A C C T G A A G T C C T A G G C A T A T C G C G T A A C G T A C G T A C G T A C G T A C G T

bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGWTGYAA
VTCACGTGATYH--
 A C G T A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
T C G A A C G T A G T C C G T A A G T C A C T G A C G T A C T G T G C A C A G T G A C T G C A T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGWTGYAA
NNCACGTGGT----
 A C G T A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

HYH/MA1425.1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CACGTGWTGYAA
NGNCACGTCANN---
 A C G T A C G T A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T T A G C C G T A A G C T A G T C A C G T A C G T A C G T

TYE7/TYE7_YPD/39-CBF1(Harbison)/Yeast

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CACGTGWTGYAA
TCACGTGAT----
 A C G T A G T C C T G A G A T C A C T G A C G T A C T G C G T A A C G T A T C G A G C T C G T A C G T A
A G C T T A G C C T G A A T G C T A C G G C A T A C T G C T G A A G C T A C G T A C G T A C G T A C G T