Running information
Running summary
Linker filtering
Mapping
Remove redundancy
Category
Peak calling
Clustering
Extra Info
Running statistics
Basic statistics
Mapping statistics of read1 (horizental) and read2 (vertical)
Running time
Linker filtering report
Linker alignment score distribution
Linker alignment score difference distribution
Tag length distribution
Linker composition
Mapping report
Mapping quality score distribution from Bedpe file
Mapping strands distribution from Bedpe file
Distribution of counts of PETs mapping to the same position in Bedpe file
Purified intra-chromosomal reads strands distribution from Bedpe file
Span distribution
Fragment length statistics
PETs span distribution
Difference of PET span distributions between strands combination -+ and average number of (++, +- and --)
Log-log plot of difference of PET span distribution
Cluster visualization
PET counts
Interaction clusters classification
Intra-chromosomal interactions visualization
Blue peaks above chromosomes are transcription factor binding sites
Red curves under chromosomes are intra-chromosomal interactions
Circular view
Circular view of inter-chromosomal interactions