Information for 5-GCGATTT (Motif 6)

A C U G A G U C A C U G C G U A A C G U A C G U C G A U
Reverse Opposite:
C G U A C G U A C G U A A C G U A G U C A C U G A G U C
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.959
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif5.83%
Number of Background Sequences with motif77.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets65.1 +/- 17.0bp
Average Position of motif in Background54.3 +/- 48.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-518d-3p MIMAT0002864 Homo sapiens miR-518d-3p Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------GCGATTT-
GCTCCAAAGGGAAGCGCTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U A C G U
A C U G A G U C A C G U A G U C A G U C C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A C U G

hsa-miR-518f MIMAT0002842 Homo sapiens miR-518f Targets (miRBase)

Match Rank:2
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------GCGATTT-
CCTCTAAAGAGAAGCGCTTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U A C G U
A G U C A G U C A C G U A G U C A C G U C G U A C G U A C G U A A C U G C G U A A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A G U C

hsa-miR-518a-3p MIMAT0002863 Homo sapiens miR-518a-3p Targets (miRBase)

Match Rank:3
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------GCGATTT-
TCCAGCAAAGGGAAGCGCTTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U A C G U
A C G U A G U C A G U C C G U A A C U G A G U C C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A G U C

hsa-miR-518b MIMAT0002844 Homo sapiens miR-518b Targets (miRBase)

Match Rank:4
Score:0.69
Offset:-14
Orientation:forward strand
Alignment:--------------GCGATTT-
ACCTCTAAAGGGGAGCGCTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U A C G U
C G U A A G U C A G U C A C G U A G U C A C G U C G U A C G U A C G U A A C U G A C U G A C U G A C U G C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A C U G

hsa-miR-518c MIMAT0002848 Homo sapiens miR-518c Targets (miRBase)

Match Rank:5
Score:0.68
Offset:-15
Orientation:forward strand
Alignment:---------------GCGATTT-
ACACTCTAAAGAGAAGCGCTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U A C G U
C G U A A G U C C G U A A G U C A C G U A G U C A C G U C G U A C G U A C G U A A C U G C G U A A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A C U G

hsa-miR-605 MIMAT0003273 Homo sapiens miR-605 Targets (miRBase)

Match Rank:6
Score:0.68
Offset:-15
Orientation:forward strand
Alignment:---------------GCGATTT-
AGGAGAAGGCACCATGGGATTTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U A C G U
C G U A A C U G A C U G C G U A A C U G C G U A C G U A A C U G A C U G A G U C C G U A A G U C A G U C C G U A A C G U A C U G A C U G A C U G C G U A A C G U A C G U A C G U C G U A

hsa-miR-548c-3p MIMAT0003285 Homo sapiens miR-548c-3p Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-12
Orientation:forward strand
Alignment:------------GCGATTT---
GCAAAAGTAATTGAGATTTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U A C G U A C G U A C G U
A C U G A G U C C G U A C G U A C G U A C G U A A C U G A C G U C G U A C G U A A C G U A C G U A C U G C G U A A C U G C G U A A C G U A C G U A C G U A C G U A C G U A C U G

hsa-miR-518e MIMAT0002861 Homo sapiens miR-518e Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------GCGATTT
CACTCTGAAGGGAAGCGCTTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U
A G U C C G U A A G U C A C G U A G U C A C G U A C U G C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U

hsa-miR-216b MIMAT0004959 Homo sapiens miR-216b Targets (miRBase)

Match Rank:9
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------GCGATTT
TCACATTTGCCTGCAGAGATTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U
A C G U A G U C C G U A A G U C C G U A A C G U A C G U A C G U A C U G A G U C A G U C A C G U A C U G A G U C C G U A A C U G C G U A A C U G C G U A A C G U A C G U A C G U

hsa-miR-302f MIMAT0005932 Homo sapiens miR-302f Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-10
Orientation:forward strand
Alignment:----------GCGATTT
AAACATGGAAGCAATTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A G U C A C U G C G U A A C G U A C G U C G A U
C G U A C G U A C G U A A G U C C G U A A C G U A C U G A C U G C G U A C G U A A C U G A G U C C G U A C G U A A C G U A C G U C G U A