Information for 4-GTGCGTA (Motif 5)

A C U G A C G U U C A G A G U C A C U G C G A U G U C A
Reverse Opposite:
A C G U G C U A G U A C A C U G A G U C G U C A A G U C
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.820
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif24.17%
Number of Background Sequences with motif2825.0
Percentage of Background Sequences with motif7.10%
Average Position of motif in Targets47.7 +/- 28.4bp
Average Position of motif in Background50.2 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4423-3p MIMAT0018936 Homo sapiens miR-4423-3p Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------GTGCGTA-
TTGTTGCTTTTTGGTGCCTAT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U
A C G U A C G U A C U G A C G U A C G U A C U G A G U C A C G U A C G U A C G U A C G U A C G U A C U G A C U G A C G U A C U G A G U C A G U C A C G U C G U A A C G U

hsa-miR-521 MIMAT0002854 Homo sapiens miR-521 Targets (miRBase)

Match Rank:2
Score:0.68
Offset:-15
Orientation:forward strand
Alignment:---------------GTGCGTA
ACACTCTAAAGGGAAGTGCGTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A
C G U A A G U C C G U A A G U C A C G U A G U C A C G U C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A C G U A C U G A G U C A C U G A C G U A C G U

hsa-miR-4788 MIMAT0019958 Homo sapiens miR-4788 Targets (miRBase)

Match Rank:3
Score:0.67
Offset:-14
Orientation:forward strand
Alignment:--------------GTGCGTA-
GCCTCCCTTAGCTGGTCCGTAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U
A C U G A G U C A G U C A C G U A G U C A G U C A G U C A C G U A C G U C G U A A C U G A G U C A C G U A C U G A C U G A C G U A G U C A G U C A C U G A C G U C G U A C G U A

hsa-miR-507 MIMAT0002879 Homo sapiens miR-507 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------GTGCGTA-
TTCACTCCAAAAGGTGCAAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U
A C G U A C G U A G U C C G U A A G U C A C G U A G U C A G U C C G U A C G U A C G U A C G U A A C U G A C U G A C G U A C U G A G U C C G U A C G U A C G U A C G U A

hsa-miR-1271 MIMAT0005796 Homo sapiens miR-1271 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------GTGCGTA-
TGAGTGCTTGCTAGGTGCCAAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U
A C G U A C U G C G U A A C U G A C G U A C U G A G U C A C G U A C G U A C U G A G U C A C G U C G U A A C U G A C U G A C G U A C U G A G U C A G U C C G U A C G U A A C U G

hsa-miR-557 MIMAT0003221 Homo sapiens miR-557 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------GTGCGTA-
AGACAAGGCCCACCCGTGCAAAC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U
C G U A A C U G C G U A A G U C C G U A C G U A A C U G A C U G A G U C A G U C A G U C C G U A A G U C A G U C A G U C A C U G A C G U A C U G A G U C C G U A C G U A C G U A A G U C

hsa-miR-96 MIMAT0000095 Homo sapiens miR-96 Targets (miRBase)

Match Rank:7
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------GTGCGTA-
AGCAAAAATGTGCTAGTGCCAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U
C G U A A C U G A G U C C G U A C G U A C G U A C G U A C G U A A C G U A C U G A C G U A C U G A G U C A C G U C G U A A C U G A C G U A C U G A G U C A G U C C G U A C G U A C G U A

hsa-miR-3941 MIMAT0018357 Homo sapiens miR-3941 Targets (miRBase)

Match Rank:8
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------GTGCGTA-
TATGATCCTCAGTTGTGTGTAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U
A C G U C G U A A C G U A C U G C G U A A C G U A G U C A G U C A C G U A G U C C G U A A C U G A C G U A C G U A C U G A C G U A C U G A C G U A C U G A C G U C G U A C G U A

hsa-miR-106b* MIMAT0004672 Homo sapiens miR-106b* Targets (miRBase)

Match Rank:9
Score:0.61
Offset:-16
Orientation:forward strand
Alignment:----------------GTGCGTA
GCAGCAAGTACCCACAGTGCGG-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A
A C U G A G U C C G U A A C U G A G U C C G U A C G U A A C U G A C G U C G U A A G U C A G U C A G U C C G U A A G U C C G U A A C U G A C G U A C U G A G U C A C U G A C U G A C G U

hsa-miR-4503 MIMAT0019039 Homo sapiens miR-4503 Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-13
Orientation:forward strand
Alignment:-------------GTGCGTA--
TAAATTCTATTTCCTGCTTAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U U C A G A G U C A C U G C G A U G U C A A C G U A C G U
A C G U C G U A C G U A C G U A A C G U A C G U A G U C A C G U C G U A A C G U A C G U A C G U A G U C A G U C A C G U A C U G A G U C A C G U A C G U C G U A C G U A C G U A