Information for 3-ATTGCAC (Motif 3)

C G U A A C G U A C G U A C U G A G U C C G U A A G U C
Reverse Opposite:
A C U G A C G U A C U G A G U C C G U A C G U A A C G U
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif133.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets43.0 +/- 22.6bp
Average Position of motif in Background52.9 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4295 MIMAT0016844 Homo sapiens miR-4295 Targets (miRBase)

Match Rank:1
Score:0.82
Offset:-9
Orientation:forward strand
Alignment:---------ATTGCAC--
AAGGAAAACATTGCACTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C G U
C G U A C G U A A C U G A C U G C G U A C G U A C G U A C G U A A G U C C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C U G

hsa-miR-130b MIMAT0000691 Homo sapiens miR-130b Targets (miRBase)

Match Rank:2
Score:0.79
Offset:-13
Orientation:forward strand
Alignment:-------------ATTGCAC--
ATGCCCTTTCATCATTGCACTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C G U
C G U A A C G U A C U G A G U C A G U C A G U C A C G U A C G U A C G U A G U C C G U A A C G U A G U C C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C U G

hsa-miR-130a MIMAT0000425 Homo sapiens miR-130a Targets (miRBase)

Match Rank:3
Score:0.79
Offset:-13
Orientation:forward strand
Alignment:-------------ATTGCAC--
ATGCCCTTTTAACATTGCACTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C G U
C G U A A C G U A C U G A G U C A G U C A G U C A C G U A C G U A C G U A C G U C G U A C G U A A G U C C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C U G

hsa-miR-301b MIMAT0004958 Homo sapiens miR-301b Targets (miRBase)

Match Rank:4
Score:0.78
Offset:-14
Orientation:forward strand
Alignment:--------------ATTGCAC--
GCTTTGACAATATCATTGCACTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C G U
A C U G A G U C A C G U A C G U A C G U A C U G C G U A A G U C C G U A C G U A A C G U C G U A A C G U A G U C C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C U G

hsa-miR-301a MIMAT0000688 Homo sapiens miR-301a Targets (miRBase)

Match Rank:5
Score:0.78
Offset:-14
Orientation:forward strand
Alignment:--------------ATTGCAC--
GCTTTGACAATACTATTGCACTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C G U
A C U G A G U C A C G U A C G U A C G U A C U G C G U A A G U C C G U A C G U A A C G U C G U A A G U C A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C U G

hsa-miR-454 MIMAT0003885 Homo sapiens miR-454 Targets (miRBase)

Match Rank:6
Score:0.78
Offset:-14
Orientation:forward strand
Alignment:--------------ATTGCAC--
ACCCTATAAGCAATATTGCACTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C G U
C G U A A G U C A G U C A G U C A C G U C G U A A C G U C G U A C G U A A C U G A G U C C G U A C G U A A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U C G U A

hsa-miR-3666 MIMAT0018088 Homo sapiens miR-3666 Targets (miRBase)

Match Rank:7
Score:0.73
Offset:-12
Orientation:forward strand
Alignment:------------ATTGCAC--
TCGGCATCTACACTTGCACTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C G U
A C G U A G U C A C U G A C U G A G U C C G U A A C G U A G U C A C G U C G U A A G U C C G U A A G U C A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C U G

hsa-miR-106a* MIMAT0004517 Homo sapiens miR-106a* Targets (miRBase)

Match Rank:8
Score:0.72
Offset:-15
Orientation:forward strand
Alignment:---------------ATTGCAC
GTAAGAAGTGCTTACATTGCAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C
A C U G A C G U C G U A C G U A A C U G C G U A C G U A A C U G A C G U A C U G A G U C A C G U A C G U C G U A A G U C C G U A A C G U A C G U A C U G A G U C C G U A A C U G

hsa-miR-143* MIMAT0004599 Homo sapiens miR-143* Targets (miRBase)

Match Rank:9
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------ATTGCAC-
ACCAGAGATGCAGCACTGCACC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U
C G U A A G U C A G U C C G U A A C U G C G U A A C U G C G U A A C G U A C U G A G U C C G U A A C U G A G U C C G U A A G U C A C G U A C U G A G U C C G U A A G U C A G U C

hsa-miR-19a MIMAT0000073 Homo sapiens miR-19a Targets (miRBase)

Match Rank:10
Score:0.69
Offset:-15
Orientation:forward strand
Alignment:---------------ATTGCAC-
TCAGTTTTGCATAGATTTGCACA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U
A C G U A G U C C G U A A C U G A C G U A C G U A C G U A C G U A C U G A G U C C G U A A C G U C G U A A C U G C G U A A C G U A C G U A C G U A C U G A G U C C G U A A G U C C G U A