Information for 5-GCGATGC (Motif 6)

C U A G A G U C A C U G C G U A A C G U U A C G A G U C
Reverse Opposite:
A C U G A U G C G U C A A C G U G U A C C U A G A G U C
p-value:1e-6
log p-value:-1.593e+01
Information Content per bp:1.792
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.83%
Number of Background Sequences with motif658.0
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets32.6 +/- 28.4bp
Average Position of motif in Background49.5 +/- 48.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-638 MIMAT0003308 Homo sapiens miR-638 Targets (miRBase)

Match Rank:1
Score:0.65
Offset:-16
Orientation:forward strand
Alignment:----------------GCGATGC--
AGGCCGCCACCCGCCCGCGATCCCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U A C G U
C G U A A C U G A C U G A G U C A G U C A C U G A G U C A G U C C G U A A G U C A G U C A G U C A C U G A G U C A G U C A G U C A C U G A G U C A C U G C G U A A C G U A G U C A G U C A G U C A C G U

hsa-miR-153 MIMAT0000439 Homo sapiens miR-153 Targets (miRBase)

Match Rank:2
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------GCGATGC--
GATCACTTTTGTGACTATGCAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U A C G U
A C U G C G U A A C G U A G U C C G U A A G U C A C G U A C G U A C G U A C G U A C U G A C G U A C U G C G U A A G U C A C G U C G U A A C G U A C U G A G U C C G U A C G U A

hsa-miR-324-5p MIMAT0000761 Homo sapiens miR-324-5p Targets (miRBase)

Match Rank:3
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------GCGATGC-
ACACCAATGCCCTAGGGGATGCG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U
C G U A A G U C C G U A A G U C A G U C C G U A C G U A A C G U A C U G A G U C A G U C A G U C A C G U C G U A A C U G A C U G A C U G A C U G C G U A A C G U A C U G A G U C A C U G

hsa-miR-33b MIMAT0003301 Homo sapiens miR-33b Targets (miRBase)

Match Rank:4
Score:0.63
Offset:-11
Orientation:forward strand
Alignment:-----------GCGATGC--
GCAATGCAACAGCAATGCAC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U A C G U
A C U G A G U C C G U A C G U A A C G U A C U G A G U C C G U A C G U A A G U C C G U A A C U G A G U C C G U A C G U A A C G U A C U G A G U C C G U A A G U C

hsa-miR-4642 MIMAT0019702 Homo sapiens miR-4642 Targets (miRBase)

Match Rank:5
Score:0.62
Offset:-12
Orientation:forward strand
Alignment:------------GCGATGC---
AGCCACCAGGGGACGATGCCAT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U A C G U A C G U
C G U A A C U G A G U C A G U C C G U A A G U C A G U C C G U A A C U G A C U G A C U G A C U G C G U A A G U C A C U G C G U A A C G U A C U G A G U C A G U C C G U A A C G U

hsa-miR-103b MIMAT0007402 Homo sapiens miR-103b Targets (miRBase)

Match Rank:6
Score:0.59
Offset:-16
Orientation:forward strand
Alignment:----------------GCGATGC
AGCAGCATTGTACAGGGCTATGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C
C G U A A C U G A G U C C G U A A C U G A G U C C G U A A C G U A C G U A C U G A C G U C G U A A G U C C G U A A C U G A C U G A C U G A G U C A C G U C G U A A C G U A C U G C G U A

hsa-miR-33a MIMAT0000091 Homo sapiens miR-33a Targets (miRBase)

Match Rank:7
Score:0.57
Offset:-12
Orientation:forward strand
Alignment:------------GCGATGC--
TGCAATGCAACTACAATGCAC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U A C G U
A C G U A C U G A G U C C G U A C G U A A C G U A C U G A G U C C G U A C G U A A G U C A C G U C G U A A G U C C G U A C G U A A C G U A C U G A G U C C G U A A G U C

hsa-miR-3622b-5p MIMAT0018005 Homo sapiens miR-3622b-5p Targets (miRBase)

Match Rank:8
Score:0.56
Offset:-11
Orientation:forward strand
Alignment:-----------GCGATGC--
TCACCTGACCTCCCATGCCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U A C G U
A C G U A G U C C G U A A G U C A G U C A C G U A C U G C G U A A G U C A G U C A C G U A G U C A G U C A G U C C G U A A C G U A C U G A G U C A G U C A C G U

hsa-miR-2964a-3p MIMAT0019748 Homo sapiens miR-2964a-3p Targets (miRBase)

Match Rank:9
Score:0.56
Offset:-15
Orientation:forward strand
Alignment:---------------GCGATGC-
ACTGATTGTCCAAACGCAATTCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C A C G U
C G U A A G U C A C G U A C U G C G U A A C G U A C G U A C U G A C G U A G U C A G U C C G U A C G U A C G U A A G U C A C U G A G U C C G U A C G U A A C G U A C G U A G U C A C G U

hsa-miR-3651 MIMAT0018071 Homo sapiens miR-3651 Targets (miRBase)

Match Rank:10
Score:0.56
Offset:-18
Orientation:forward strand
Alignment:------------------GCGATGC
TCATGTACCAGCGACCGGGCTATG-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C A C U G C G U A A C G U U A C G A G U C
A C G U A G U C C G U A A C G U A C U G A C G U C G U A A G U C A G U C C G U A A C U G A G U C A C U G C G U A A G U C A G U C A C U G A C U G A C U G A G U C A C G U C G U A A C G U A C U G A C G U