Information for 3-GTGCTGA (Motif 4)

A C U G A C G U A C U G A G U C A C G U C U A G C G U A
Reverse Opposite:
A C G U A G U C G U C A A C U G A G U C C G U A A G U C
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.935
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif694.6
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets52.4 +/- 28.4bp
Average Position of motif in Background50.7 +/- 39.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3065-3p MIMAT0015378 Homo sapiens miR-3065-3p Targets (miRBase)

Match Rank:1
Score:0.77
Offset:-16
Orientation:forward strand
Alignment:----------------GTGCTGA
CTCCAACAATATCCTGGTGCTGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A
A G U C A C G U A G U C A G U C C G U A C G U A A G U C C G U A C G U A A C G U C G U A A C G U A G U C A G U C A C G U A C U G A C U G A C G U A C U G A G U C A C G U A C U G C G U A

hsa-miR-4291 MIMAT0016922 Homo sapiens miR-4291 Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-8
Orientation:forward strand
Alignment:--------GTGCTGA-
AGCTGTTCCTGCTGAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A A C G U
C G U A A C U G A G U C A C G U A C U G A C G U A C G U A G U C A G U C A C G U A C U G A G U C A C G U A C U G C G U A C G U A

hsa-miR-197 MIMAT0000227 Homo sapiens miR-197 Targets (miRBase)

Match Rank:3
Score:0.68
Offset:-14
Orientation:forward strand
Alignment:--------------GTGCTGA-
GCTGGGTGGAGAAGGTGGTGAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A A C G U
A C U G A G U C A C G U A C U G A C U G A C U G A C G U A C U G A C U G C G U A A C U G C G U A C G U A A C U G A C U G A C G U A C U G A C U G A C G U A C U G C G U A C G U A

hsa-miR-34a* MIMAT0004557 Homo sapiens miR-34a* Targets (miRBase)

Match Rank:4
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------GTGCTGA---
AGGGCAGTATACTTGCTGATTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A A C G U A C G U A C G U
C G U A A C U G A C U G A C U G A G U C C G U A A C U G A C G U C G U A A C G U C G U A A G U C A C G U A C G U A C U G A G U C A C G U A C U G C G U A A C G U A C G U A C U G

hsa-miR-3663-3p MIMAT0018085 Homo sapiens miR-3663-3p Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-16
Orientation:forward strand
Alignment:----------------GTGCTGA
GCGCCCGGCCTGTGTGGTGCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A
A C U G A G U C A C U G A G U C A G U C A G U C A C U G A C U G A G U C A G U C A C G U A C U G A C G U A C U G A C G U A C U G A C U G A C G U A C U G A G U C A C G U A G U C C G U A

hsa-miR-29c MIMAT0000681 Homo sapiens miR-29c Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-16
Orientation:forward strand
Alignment:----------------GTGCTGA
TAACCGATTTCAAATGGTGCTA-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A
A C G U C G U A C G U A A G U C A G U C A C U G C G U A A C G U A C G U A C G U A G U C C G U A C G U A C G U A A C G U A C U G A C U G A C G U A C U G A G U C A C G U C G U A A C G U

hsa-miR-29a MIMAT0000086 Homo sapiens miR-29a Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-16
Orientation:forward strand
Alignment:----------------GTGCTGA
TAACCGATTTCAGATGGTGCTA-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A
A C G U C G U A C G U A A G U C A G U C A C U G C G U A A C G U A C G U A C G U A G U C C G U A A C U G C G U A A C G U A C U G A C U G A C G U A C U G A G U C A C G U C G U A A C G U

hsa-miR-29b MIMAT0000100 Homo sapiens miR-29b Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-17
Orientation:forward strand
Alignment:-----------------GTGCTGA
AACACTGATTTCAAATGGTGCTA-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A
C G U A C G U A A G U C C G U A A G U C A C G U A C U G C G U A A C G U A C G U A C G U A G U C C G U A C G U A C G U A A C G U A C U G A C U G A C G U A C U G A G U C A C G U C G U A A C G U

hsa-miR-4793-3p MIMAT0019966 Homo sapiens miR-4793-3p Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-16
Orientation:forward strand
Alignment:----------------GTGCTGA
AGCCAGCCAACTCACAGTGCAGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A
C G U A A C U G A G U C A G U C C G U A A C U G A G U C A G U C C G U A C G U A A G U C A C G U A G U C C G U A A G U C C G U A A C U G A C G U A C U G A G U C C G U A A C U G C G U A

hsa-miR-195 MIMAT0000461 Homo sapiens miR-195 Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------GTGCTGA--
GCCAATATTTCTGTGCTGCTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U C U A G C G U A A C G U A C G U
A C U G A G U C A G U C C G U A C G U A A C G U C G U A A C G U A C G U A C G U A G U C A C G U A C U G A C G U A C U G A G U C A C G U A C U G A G U C A C G U C G U A