Information for 1-TCCGATTNSD (Motif 1)

A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
Reverse Opposite:
G T A C A T G C C T G A T G C A C G T A C G A T A G T C T A C G C T A G C G T A
p-value:1e-84
log p-value:-1.952e+02
Information Content per bp:1.580
Number of Target Sequences with motif2421.0
Percentage of Target Sequences with motif54.67%
Number of Background Sequences with motif16255.8
Percentage of Background Sequences with motif40.08%
Average Position of motif in Targets100.5 +/- 55.7bp
Average Position of motif in Background99.4 +/- 78.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TCCGATTNSD
NWTYAATTDA-
 A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
T C G A G C A T A G C T G A T C C T G A C G T A A C G T A G C T C G A T T C G A A C G T

GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCCGATTNSD
ATCSGATCVG-
 A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
C G T A C A G T G T A C A T G C C T A G C G T A A C G T A G T C T C G A T C A G A C G T

GATA20/MA1324.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TCCGATTNSD
GATCCGAT----
 A C G T A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
C A T G C G T A A C G T A G T C A T G C C T A G C T G A G C A T A C G T A C G T A C G T A C G T

CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TCCGATTNSD
AAATTSAATTTN-
 A C G T A C G T A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
G C T A C T G A C G T A A G C T A G C T A T C G T C G A C T G A A C G T G A C T C G A T A C T G A C G T

GATA19/MA1323.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCCGATTNSD
AATCCGATCNG-
 A C G T A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
T C G A G C T A G A C T A G T C T G A C A T C G C G T A A C G T A G T C A C G T T C A G A C G T

GATA8/MA1017.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCCGATTNSD
-CAGATCTAG
 A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
A C G T A T G C T G C A T C A G C G T A G A C T A G T C A G C T T C G A T C A G

GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCGATTNSD
DDWTYAGATCTR-
 A C G T A C G T A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
C T G A C T G A G C A T G A C T A G T C T C G A C T A G C G T A A C G T G A T C A G C T T C A G A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCCGATTNSD
TAATYNRATTAR-
 A C G T A C G T A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCCGATTNSD
TAATCHGATTAC-
 A C G T A C G T A C G T A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T

GATA15/MA1016.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCCGATTNSD
TATGATCAG-
 A C G T G A T C A T G C C T A G C G T A A C G T A C G T G A C T T A C G C A T G
A G C T C T G A G A C T T C A G C G T A G C A T A T G C C T G A T C A G A C G T