Information for 17-TCGRGTGGCC (Motif 29)

G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C
Reverse Opposite:
T C A G A T C G A G T C G T A C G T C A G A T C G A C T A G T C A C T G C T G A
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.795
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets119.6 +/- 47.2bp
Average Position of motif in Background127.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

tin/MA0247.2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCGRGTGGCC
TTTCAAGTGG--
 A C G T A C G T G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C
C G A T A G C T A G C T A G T C C T G A C G T A A C T G A C G T A C T G A T C G A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCGRGTGGCC-
NNNTTGAGTGGNNN
 A C G T A C G T A C G T G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

MET32/MA0334.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCGRGTGGCC
---TGTGGCG
 G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C
A C G T A C G T A C G T A C G T C T A G C A G T A C T G A C T G G A T C A C T G

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCGRGTGGCC--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

ceh-22/MA0264.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCGRGTGGCC
TTTCAAGTGGN-
 A C G T A C G T G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C
A C G T A C G T C G A T A T G C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A C G T

MA0264.1_ceh-22/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCGRGTGGCC
TTTCAAGTGGN-
 A C G T A C G T G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C
A C G T A C G T C G A T A T G C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A C G T

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCGRGTGGCC--
CAGTGTGACCRK
 G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C A C G T A C G T
G A T C C T G A C T A G G C A T C T A G A G C T A C T G T C G A G T A C G A T C T C A G A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCGRGTGGCC--
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

BHLH112/MA0961.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCGRGTGGCC
NCAAGTGGN-
 G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C
C T A G A G T C C G T A C G T A A C T G A C G T A C T G A C T G T A G C A C G T

CMTA3/MA0970.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCGRGTGGCC
CCGCGTTAC-
 G A C T G T A C A C T G C T G A C T A G A C G T A C T G A C T G A T G C A G T C
T G A C G T A C C T A G G A T C C T A G G A C T G A C T T C G A A G T C A C G T