Information for 11-TTGTWGTCTTCT (Motif 19)

A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A A C T G C G T A A G T C C G A T C G T A A G T C C G T A C G T A
p-value:1e-13
log p-value:-3.177e+01
Information Content per bp:1.937
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.6 +/- 46.1bp
Average Position of motif in Background88.8 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:1
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:TTGTWGTCTTCT
-----NTCTTCT
 A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C A C G T A C G T A G T C A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:2
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TTGTWGTCTTCT
-----GCCTTCT
 A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T

SGR5/MA1159.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGTWGTCTTCT---
TTTTTGTCTTTTTTT
 A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G A T G C A T C A G T A G C T A T C G C A G T G A T C G C A T A G C T G C A T G C A T G A C T A G C T C G A T

NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTGTWGTCTTCT-
TTTTGTCGTTTTBTD
 A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G C A T A G C T A G C T A G C T A C T G A C G T A G T C A C T G A C G T G A C T C G A T G C A T A T C G A G C T C A T G

IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTGTWGTCTTCT-
TTTTGTCTTTTTBTK
 A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G C A T A G C T A C G T A C G T A C T G A C G T G A T C A C G T A C G T A G C T C G A T G C A T A G T C G A C T C A G T

At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGTWGTCTTCT-
TTTTGTCKTTTTSTG
 A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G C A T A G C T A G C T A C G T A C T G A C G T G A T C A C T G A C G T A G C T C G A T G C A T A T C G G A C T C A T G

ARF16/MA1688.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGTWGTCTTCT-
NNTCTTGTCTTGTN
 A C G T A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G A C T C A G T G A C T A G T C G C A T A C G T A C T G A G C T T G A C A C G T C A G T A C T G A C G T G A C T

IDD2/MA1373.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGTWGTCTTCT-
TTTTGTCGTTTTNTN
 A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T
C G A T A G C T A C G T A G C T A C T G A C G T A G T C A C T G A C G T A G C T C G A T G C A T T A C G A G C T C A T G

JKD/MA1156.1/Jaspar

Match Rank:9
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TTGTWGTCTTCT-
TTTTTTTTTGTCGTTTTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G C A T G C A T G C A T C G A T C G A T C G A T A G C T A G C T A G C T A C T G A C G T G A T C A C T G A C G T G A C T C G A T G C A T A T G C G A C T C A T G

NUC/MA1157.1/Jaspar

Match Rank:10
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------TTGTWGTCTTCT-
TTTTTTTTTGTCGTTTTGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G C A T G C A T G C A T C G A T C G A T G C A T A G C T A C G T A G C T A C T G A C G T A G T C A C T G A C G T G A C T C G A T G C A T A T C G A G C T C A T G