Information for 2-CTTAGTMSGA (Motif 9)

T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
Reverse Opposite:
G C A T T G A C A T C G C A G T C T G A T A G C A G C T G T C A G C T A A C T G
p-value:1e-4
log p-value:-1.013e+01
Information Content per bp:1.557
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif1990.1
Percentage of Background Sequences with motif4.76%
Average Position of motif in Targets65.1 +/- 21.0bp
Average Position of motif in Background49.7 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CG2931(RRM)/Drosophila_melanogaster-RNCMPT00147-PBM/HughesRNA

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTTAGTMSGA
CTTAGTT---
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
A G T C A C G T A C G T C G T A A C T G A C G T G C A T A C G T A C G T A C G T

YAP7/YAP7_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTTAGTMSGA
CTTAGTAAG-
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
G T A C A C G T C A G T C G T A A T C G A G C T G T C A C G T A A C T G A C G T

An_0287(RRM)/Aspergillus_nidulans-RNCMPT00287-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTTAGTMSGA
CGTAGTA---
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
G T A C C A T G A C G T C G T A A C T G C G A T C G T A A C G T A C G T A C G T

YAP7(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTAGTMSGA
ATTAGTAAGC
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
G T C A A G C T A C G T C T G A T A C G A G C T T G C A G C T A A C T G G T A C

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTTAGTMSGA--
GCACAYAGTAGGKCY
 A C G T A C G T A C G T T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

SF1(KH)/Drosophila_melanogaster-RNCMPT00065-PBM/HughesRNA

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTAGTMSGA
NGTTAGT----
 A C G T T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
A G C T C T A G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T

ARR1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTAGTMSGA
-TTAGTAA--
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T

YAP3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTAGTMSGA
-TTAGTAA--
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T

YAP5/Literature(Harbison)/Yeast

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTAGTMSGA
-TTAGTAA--
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T

YAP6/Literature(Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTAGTMSGA
-TTAGTAA--
 T G A C C G A T C A G T T C G A A C T G G A C T G T C A A T G C A C T G C G T A
A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T