Information for 4-CCAATSKWTGCH (Motif 5)

G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
Reverse Opposite:
C A T G T A C G T A G C C G T A G C T A T G C A T A G C G T C A G C A T C G A T A T C G C A T G
p-value:1e-5
log p-value:-1.367e+01
Information Content per bp:1.580
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif53.33%
Number of Background Sequences with motif2664.4
Percentage of Background Sequences with motif6.37%
Average Position of motif in Targets37.7 +/- 23.2bp
Average Position of motif in Background50.3 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAP2/Literature(Harbison)/Yeast

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAATSKWTGCH
CCAAT-------
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HAP3/Literature(Harbison)/Yeast

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAATSKWTGCH
CCAAT-------
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HAP5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAATSKWTGCH
CCAAT-------
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HAP5(MacIsaac)/Yeast

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAATSKWTGCH
CCAAT-------
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HAP3(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAATSKWTGCH
CCAAT-------
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.4/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCAATSKWTGCH-
-NNATGTTTACAT
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C A C G T
A C G T G C T A G T A C G C T A C G A T C T A G G C A T C A G T A C G T C T G A G A T C G C T A G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCAATSKWTGCH
-AAATCACTGC-
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

CBF(- other)/several species/AthaMap

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCAATSKWTGCH
AATTCCAATTATA---
 A C G T A C G T A C G T A C G T G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
C G T A C G T A C A G T C G A T G T A C A G T C C G T A C G T A A C G T C G A T G C T A G C A T G C T A A C G T A C G T A C G T

ARR10(GARP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAATSKWTGCH
GCGGATCTTANC-
 A C G T G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C
A T C G G T A C C T A G C A T G C G T A A C G T A G T C A C G T G C A T G T A C A T C G A G T C A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAATSKWTGCH---
CCATTGTATGCAAAT
 G T A C T A G C C G T A C G T A A C G T A T C G A C G T C G A T C G A T A C T G A T G C G T A C A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T