Information for 1-AMACTGGGSA (Motif 4)

C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
Reverse Opposite:
A G C T T A G C A G T C A T G C T G A C C G T A A C T G A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.825
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif102.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets28.2 +/- 32.5bp
Average Position of motif in Background50.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AMACTGGGSA
WDNCTGGGCA
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AMACTGGGSA--
-TACTTGGCAGA
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

RIM101/Literature(Harbison)/Yeast

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AMACTGGGSA
---CTTGGCA
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A

RIM101(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AMACTGGGSA
---CTTGGCA
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A

ABF1/MA0570.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AMACTGGGSA--
ACACGTGGCATA
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A A C G T A C G T
G T C A A G T C T C G A A G T C C T A G G A C T C T A G C A T G G T A C C T G A C G A T C G T A

MET31/Literature(Harbison)/Yeast

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AMACTGGGSA
AAACTGTGG-
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

MET32/Literature(Harbison)/Yeast

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AMACTGGGSA
AAACTGTGG-
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

ABF1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AMACTGGGSA
ACACGTGGC-
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C T G G T A C A C G T

REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AMACTGGGSA
AAACAGAGBA
 C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
C T G A T C G A C T G A G T A C T C G A T C A G T C G A T C A G A C T G T G C A

REF6/MA1415.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AMACTGGGSA
AAAACAGAGCA
 A C G T C G T A G T C A C G T A G T A C C G A T A C T G A T C G A C T G A T C G C T G A
C T G A C T G A G C T A T C G A A G T C T C G A A C T G C T G A C A T G A G T C G C T A