Information for 5-GTCGGCAC (Motif 21)

A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G T C A C T G C G T A A G T C
p-value:1e-2
log p-value:-5.297e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background42.3 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GTCGGCAC
TGTCGGCA-
 A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
G A C T A C T G C G A T A G T C A C T G C T A G A G T C C T G A A C G T

Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GTCGGCAC
TGTCGGCA-
 A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
G A C T A C T G C G A T A G T C A C T G C T A G A G T C C G T A A C G T

DREB1G/MA1032.1/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--GTCGGCAC
ATGTCGGCAN
 A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
T G C A C G A T A C T G A G C T A G T C A C T G A C T G A G T C C T G A A C G T

CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.82
Offset:-8
Orientation:reverse strand
Alignment:--------GTCGGCAC
NNNNNNWHGTCGGYN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
C G T A G C T A C G T A C G T A G A C T C G A T C G T A G A C T A C T G A C G T A G T C A C T G C T A G A G T C T C G A A C G T

CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GTCGGCAC
NATGTCGGYR-
 A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
A C G T C G T A C G A T T A C G G A C T G A T C T C A G C T A G G A T C T C G A A C G T

DREB1C/MA1670.1/Jaspar

Match Rank:6
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----GTCGGCAC--
NNNATGTCGGCAANN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C A C G T A C G T
C G A T G C A T C G A T C G T A G C A T C T A G A C G T A G T C C A T G C T A G G A T C C T G A C G T A G C T A C G T A

CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----GTCGGCAC
NNATGTCGGYNR
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
A G C T C A G T C G T A G C A T C A T G G C A T A G T C A C T G C T A G G A T C T C G A C T A G

DREB1A/MA0971.1/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GTCGGCAC
ATGTCGGCAA
 A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C
C G T A G A C T C T A G G A C T T G A C A C T G C T A G A G T C T C G A T C A G

RAP210/MA1249.1/Jaspar

Match Rank:9
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GTCGGCAC---
TTTTGTCGGCAAAGG
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T
G C A T C G A T C A G T G A C T A C T G C G A T A G T C A C T G C T A G A G T C C T G A C T G A G T C A C T A G C T A G

ERF027/MA1227.2/Jaspar

Match Rank:10
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----GTCGGCAC--
NNNNTGTCGGCAANN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C C G T A A G T C A C G T A C G T
C G T A G C A T C G A T C G A T G A C T C A T G C G A T A G T C C A T G C T A G G A T C C T G A C T G A G C T A C G T A