Information for 2-TACDTGTTGCTT (Motif 2)

A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G A G T C G T C A C G T A A G T C C T G A G C T A A C T G A C G T C T G A
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.788
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.3 +/- 28.2bp
Average Position of motif in Background61.5 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TACDTGTTGCTT-
NNNCACCTGTTGCTNN
 A C G T A C G T A C G T A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T A C G T
C G T A C T G A G T A C G T A C C T G A G T A C G A T C C G A T A T C G G A C T C A G T C T A G T G A C G C A T A G C T G A C T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TACDTGTTGCTT
CACCTGTTGC--
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C A C G T A C G T

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TACDTGTTGCTT
NTTCTGTTGCNN
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G

RAV1/MA0582.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TACDTGTTGCTT
NTTCTGTTGCNN
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G

RFX7/MA1554.1/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TACDTGTTGCTT-
----CGTTGCTAT
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T

MET32/MA0334.1/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TACDTGTTGCTT
----TGTGGCG-
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A G T A C T G A C T G G A T C A C T G A C G T

SCRT1/MA0743.2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TACDTGTTGCTT-
NNCCACCTGTTGAANN
 A C G T A C G T A C G T A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T A C G T
C G T A T C G A G T A C G T A C C T G A G A T C G A T C C G A T T A C G G A C T C A G T C T A G T G C A G C T A G A C T G C A T

NAC028/MA1427.1/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TACDTGTTGCTT--
-----GTTGCGTAT
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T C T A G A G T C A C T G A C G T T C G A G C A T

NAC058/MA0938.1/Jaspar

Match Rank:9
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TACDTGTTGCTT--
------TTGCGTGN
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T A G T A G C A C T G C A G T C T A G G A C T

RFX1/MA0365.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TACDTGTTGCTT
----GGTTGCCA
 A G C T G T C A G T A C C A G T A G C T A C T G A C G T A C G T A C T G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C G T A C G T C T A G A G T C A G C T C G T A