Information for 9-TGAAGCCAAATA (Motif 19)

A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.241e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background35.5 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGAAGCCAAATA
-GAAACC-----
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGAAGCCAAATA
-GAAACC-----
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T

IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGAAGCCAAATA
VAWAAAGACAAA--
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
T C A G C G T A G C T A C T G A T G C A T G C A C T A G T G C A A G T C T C G A T C G A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAAGCCAAATA
-CGTGCCAAG--
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

HNRNPR(RRM)/Gallus_gallus-RNCMPT00288-PBM/HughesRNA

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGAAGCCAAATA
-----CCAAATT
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G T A C G T A C C G T A C G T A C G T A C G A T A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCAAATA
NGAAGC------
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGAAGCCAAATA--
---AACCAATTAAT
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

tll/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGCCAAATA
ACNAAAAGTCAAANN
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
T C G A A T G C A C G T C G T A C T G A G T C A T G C A C T A G A G C T A G T C C G T A C G T A G T C A G A T C G T A C

HAP2/MA0313.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGAAGCCAAATA
----ACCAA---
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T C T G A G T A C A G T C G T C A C G T A A C G T A C G T A C G T

SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAAGCCAAATA
AAAAAAGACAAA--
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A
T C G A C T G A C G T A C G T A T C G A C G T A A C T G C G T A A G T C C G T A C G T A C T G A A C G T A C G T