Information for 10-GTATAAATGC (Motif 18)

A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C
p-value:1e-3
log p-value:-7.241e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background68.5 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTATAAATGC-----
GTATAAAAGGCGGGG
 A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTATAAATGC-----
GTATAAAAGGCGGGG
 A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

CST6(MacIsaac)/Yeast

Match Rank:3
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:GTATAAATGC-
---NAAATGCA
 A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C A T G T C G A C T G A C G T A A C G T C A T G T A G C T C G A

TATA-box/Drosophila-Promoters/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GTATAAATGC--
CTATAAAAGCSV
 A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T
T A G C A C G T C G T A A C G T C G T A C G T A C G T A C G T A C T A G T A G C T A G C T A C G

abd-A/dmmpmm(Down)/fly

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GTATAAATGC
--ATAAAT--
 A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C
A C G T A C G T C G T A G C A T G T C A G C T A G C T A G C A T A C G T A C G T

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GTATAAATGC
GAGTATAA----
 A C G T A C G T A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C
C T A G G A C T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T

TBP(- other)/several species/AthaMap

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTATAAATGC-
ACTATAAATACC
 A C G T A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T
G C A T G A T C G C A T C G T A A G C T C G T A C G T A C T G A G C A T C T G A A T G C T G A C

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTATAAATGC
--ATAATT--
 A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C
A C G T A C G T C G T A A G C T C T G A C G T A C G A T A C G T A C G T A C G T

Tb_0219(RRM)/Trypanosoma_brucei-RNCMPT00219-PBM/HughesRNA

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTATAAATGC
NAGTATAT----
 A C G T A C G T A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C
A G C T G C T A A C T G A C G T C G T A A C G T C G T A C G A T A C G T A C G T A C G T A C G T

EDT1/MA0990.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTATAAATGC
CAATTAATGC
 A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A G T C
G A T C G T C A C G T A G C A T G C A T T C G A G C T A G C A T C A T G G A T C