Information for 3-AGWWWWGR (Motif 16)

C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A
Reverse Opposite:
A G C T G A T C C G T A C G A T G C T A G C A T A G T C C G A T
p-value:1e-3
log p-value:-7.333e+00
Information Content per bp:1.612
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif1171.5
Percentage of Background Sequences with motif2.80%
Average Position of motif in Targets49.8 +/- 28.6bp
Average Position of motif in Background49.4 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA4/MA0482.2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGWWWWGR--
NNAGATAAGGNN
 A C G T A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T A C G T
C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

GATA6/MA1104.2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGWWWWGR---
NNAGATAAGATAN
 A C G T A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T A C G T A C G T
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGWWWWGR
NVAGATAAGR
 A C G T A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

pros/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGWWWWGR
AGNCATG-
 C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A
C T G A A C T G G C T A T A G C C T G A C G A T A C T G A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGWWWWGR-
CAGATAAGGN
 A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA1/MA0035.4/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGWWWWGR-
NNAGATTAGAN
 A C G T A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AGWWWWGR-
WNWARWDGAAATGAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T
G C A T C G T A G C A T C G T A T C G A C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C T G G T C A G C A T

elt-2/MA1701.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGWWWWGR-
NTGATAAGAA
 A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T
A G T C G C A T C A T G C T G A A C G T C G T A T C G A A C T G T C G A C T G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGWWWWGR-
NAGATAAGNN
 A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

GATA2/MA0036.3/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGWWWWGR-
NNAGATAAGNN
 A C G T A C G T C G T A C T A G C G T A C G A T G C T A C G A T C T A G C T G A A C G T
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A