Information for 6-AGTAGGCTAC (Motif 12)

C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A G T C A G T C A C G T C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.934e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background84.1 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSI(RRM)/Drosophila_melanogaster-RNCMPT00100-PBM/HughesRNA

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGTAGGCTAC
AGTAGGG---
 C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
C G T A A C T G A C G T C G T A A C T G C A T G C T A G A C G T A C G T A C G T

HRB27C(RRM)/Drosophila_melanogaster-RNCMPT00093-PBM/HughesRNA

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGTAGGCTAC
--TAGGTTA-
 C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
A C G T A C G T A C G T C G T A C T A G A C T G C G A T C G A T C T G A A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGTAGGCTAC
ATAGTAGGTG--
 A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T A C G T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00099-PBM/HughesRNA

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGTAGGCTAC
AGTAGGT---
 C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
C G T A A C T G A C G T C G T A A C T G C A T G C G A T A C G T A C G T A C G T

HRB27C(RRM)/Drosophila_melanogaster-RNCMPT00028-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGTAGGCTAC
--TAGGTTA-
 C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
A C G T A C G T A C G T C G T A A C T G A C T G C G A T C G A T C T G A A C G T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00040-PBM/HughesRNA

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGTAGGCTAC
AGTAGTT---
 C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
C G T A A C T G A C G T C G T A A C T G C A G T C G A T A C G T A C G T A C G T

su(Hw)/MA0533.1/Jaspar

Match Rank:7
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AGTAGGCTAC----
GCCCAAAAGTATGCAACAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A T C G G A T C G T A C A G T C T C G A C G T A C T G A C G T A C T A G A G C T C G T A A C G T C T A G G T A C G C T A C T G A G A T C C T G A G T C A G C T A G C A T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTAGGCTAC-------
-ACATGCTACCTAATAC
 C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AGTAGGCTAC
GCACAYAGTAGGKCY-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C A C G T

At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTAGGCTAC
AGTARAAW--
 C G T A A C T G A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C
C G T A A C T G A C G T C T G A C T G A T C G A T G C A C G T A A C G T A C G T