Information for 10-ACGCACCGTTTT (Motif 9)

C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A G T C A C T G A T C G C A G T A T C G A G T C A C T G A C G T
p-value:1e-28
log p-value:-6.471e+01
Information Content per bp:1.912
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 32.9bp
Average Position of motif in Background37.4 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF13/MA0657.1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ACGCACCGTTTT-
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACGCACCGTTTT--
NNGCACCTTTCTCC
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PABPC3(RRM)/Homo_sapiens-RNCMPT00153-PBM/HughesRNA

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:ACGCACCGTTTT-
------GGTTTTC
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G A C G T A C G T A C G T A C G T A G T C

ROX8(RRM)/Drosophila_melanogaster-RNCMPT00148-PBM/HughesRNA

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACGCACCGTTTT
-----CCATTTT
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G A T C C G T A A G C T A C G T A C G T A C G T

Pp_0229(RRM)/Physcomitrella_patens-RNCMPT00229-PBM/HughesRNA

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ACGCACCGTTTT-
------TGTTTTT
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G A T A C G T A C G T A C G T C A G T

At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACGCACCGTTTT
---CACCGCTT-
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A A G T C A G T C A C T G G A T C G A C T G C A T A C G T

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACGCACCGTTTT
GGNNGCACCG----
 A C G T A C G T C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
T C A G T C A G T C G A T C G A A T C G A G T C C T G A A G T C A G T C A C T G A C G T A C G T A C G T A C G T

AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACGCACCGTTTT
----CHCCTTTT
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C A G T C A G T C A C G T A C G T C G A T A C G T

CPEB2(RRM)/Homo_sapiens-RNCMPT00012-PBM/HughesRNA

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ACGCACCGTTTT-
------CTTTTTT
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T A C G T A C G T A C G T A C G T

dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ACGCACCGTTTT
----GCCTTTTT
 C G T A A G T C A C T G A T G C G T C A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T A C G T A C G T C G A T G C A T