Information for 8-CGTGTCGTTT (Motif 7)

A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T
Reverse Opposite:
C G T A C T G A T G C A T G A C T C A G T C G A T G A C C T G A T A G C T A C G
p-value:1e-72
log p-value:-1.660e+02
Information Content per bp:1.652
Number of Target Sequences with motif341.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif316.8
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets48.8 +/- 26.5bp
Average Position of motif in Background51.7 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARF4/MA1697.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTCGTTT
NNCTTGTCGTNN
 A C G T A C G T A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T
C A G T A G C T A T G C C A G T A G C T A T C G A G C T A G T C A C T G A C G T A T C G A C G T

AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGTGTCGTTT
TTTGTCGTTT
 A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T
A G C T G A C T A C G T A C T G A C G T A G T C A C T G A C G T G C A T C G A T

HAC1/MA0310.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTCGTTT
CACGTGTC----
 A C G T A C G T A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T
A G T C C G T A A G T C A C T G A C G T A C T G A C G T G A T C A C G T A C G T A C G T A C G T

FXR1(KH)/Homo_sapiens-RNCMPT00161-PBM/HughesRNA

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGTGTCGTTT
-TTGTCATT-
 A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T
A C G T A C G T A G C T A C T G A G C T A G T C C T G A A C G T A C G T A C G T

IDD2/MA1373.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTCGTTT----
TTTTGTCGTTTTNTN
 A C G T A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T A C G T A C G T A C G T A C G T
C G A T A G C T A C G T A G C T A C T G A C G T A G T C A C T G A C G T A G C T C G A T G C A T T A C G A G C T C A T G

MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGTGTCGTTT-
TTTTGTCGTTTW
 A C G T A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T A C G T
G A C T A C G T A G C T G A C T A C T G C A G T A G T C A T C G A C G T G C A T G C A T G C A T

IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGTGTCGTTT--
TTTGTCKTTTTN
 A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T A C G T A C G T
A G C T A G C T A G C T A C T G A C G T A G T C A C T G A C G T G A C T C G A T G C A T A T C G

bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGTGTCGTTT
--TGTCGGTR
 A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T
A C G T A C G T A G C T A C T G A C G T A G T C A C T G A C T G A G C T C T G A

UPC2/MA0411.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CGTGTCGTTT-
----TCGTATA
 A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T C G T A G A C T T C G A

NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTCGTTT----
TTTTGTCGTTTTBTD
 A C G T A T G C A T C G G A C T A C T G A G C T A G T C A C T G A C G T G A C T G C A T A C G T A C G T A C G T A C G T
G C A T A G C T A G C T A G C T A C T G A C G T A G T C A C T G A C G T G A C T C G A T G C A T A T C G A G C T C A T G