Information for 8-AGTGGGTCCCAC (Motif 6)

C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C
Reverse Opposite:
C T A G G A C T C T A G C T A G C T A G G C T A G A T C G A T C G A T C C G T A G A T C G C A T
p-value:1e-73
log p-value:-1.699e+02
Information Content per bp:1.602
Number of Target Sequences with motif317.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif274.7
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets48.0 +/- 25.2bp
Average Position of motif in Background48.3 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGTCCCAC
HNHNGTGGGNCCCAC
 A C G T A C G T A C G T C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C
G C T A C G T A G C T A G C T A T C A G A G C T C T A G C T A G C T A G C G A T G A T C G T A C G A T C C T G A G A T C

TCP15/MA1062.2/Jaspar

Match Rank:2
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGTCCCAC----
NNANGTGGGNCCCACNTNN
 A C G T A C G T A C G T C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C A C G T A C G T A C G T A C G T
C G T A G C T A C G T A C G T A T C A G G A C T C T A G C A T G C T A G G C A T G A T C A G T C G A T C C T G A A G T C G C A T G C A T C G A T G C A T

TCP20/MA1065.2/Jaspar

Match Rank:3
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGTCCCAC----
NNANGTGGGNCCCACNTNN
 A C G T A C G T A C G T C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C A C G T A C G T A C G T A C G T
C G T A G C T A G C T A C G A T T C A G G A C T C T A G C A T G C T A G G C A T G A T C G A T C G A T C C T G A A G T C G C A T C G A T C G A T G C A T

TCP7/MA1291.1/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:AGTGGGTCCCAC
-GTGGGNCCCAC
 C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C
A C G T T C A G G A C T A C T G A C T G C T A G G A C T A G T C A G T C A G T C C T G A A G T C

At1g72010/MA1288.1/Jaspar

Match Rank:5
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-AGTGGGTCCCAC
ATGTGGGCCCCAC
 A C G T C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C
C G T A C G A T T C A G A G C T C T A G A C T G C T A G G T A C A G T C G T A C G A T C C T G A A G T C

TCP21/MA1287.1/Jaspar

Match Rank:6
Score:0.93
Offset:0
Orientation:forward strand
Alignment:AGTGGGTCCCAC--
TGTGGGCCCCACTT
 C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C A C G T A C G T
C G A T T C A G A G C T A C T G A C T G C T A G G T A C A G T C G T A C G A T C C T G A A G T C G C A T G C A T

At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-AGTGGGTCCCAC--
WDGTGGGCCCCACDN
 A C G T C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C A C G T A C G T
C G A T C A T G T C A G A G C T C T A G A C T G C T A G G T A C G T A C G T A C G T A C T C G A A T G C C G T A C G A T

TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGTCCCAC
NNDDGTGGGSCCCAC
 A C G T A C G T A C G T C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C
T A G C C G T A C G A T C G A T T C A G G A C T C A T G C A T G C T A G T A C G G A T C G T A C G T A C C T G A G A T C

At2g45680/MA1285.1/Jaspar

Match Rank:9
Score:0.90
Offset:-8
Orientation:forward strand
Alignment:--------AGTGGGTCCCAC-
CCATTTGCCGTGGGTCCCACC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C A C G T
G T A C T G A C G T C A G A C T A C G T G C A T A T C G G A T C G A T C T C A G A G C T C T A G C T A G C T A G G A C T A G T C G T A C A G T C T C G A A G T C G T A C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.87
Offset:1
Orientation:forward strand
Alignment:AGTGGGTCCCAC
-GTGGGCCCCA-
 C G T A C T A G G C A T C T A G C T A G C T A G C G A T G A T C G A T C G A T C C T G A G A T C
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T