Information for 6-DACACGCGCG (Motif 5)

C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G
Reverse Opposite:
T G A C C T A G G A T C A T C G A G T C C A T G A G C T C A T G C A G T G A T C
p-value:1e-81
log p-value:-1.888e+02
Information Content per bp:1.616
Number of Target Sequences with motif525.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif590.3
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets49.7 +/- 27.7bp
Average Position of motif in Background47.2 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:DACACGCGCG--
HHCACGCGCBTN
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G A C G T A C G T
G A C T G T A C A T G C C G T A A G T C C A T G A G T C C A T G G A T C A G T C G C A T G A T C

FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----DACACGCGCG
TKNNNYYCACGCGCY
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G
A G C T C A T G G C T A G C T A G C A T G A C T G A T C T A G C T C G A A G T C C A T G G A T C C A T G G T A C A G C T

FHY3/MA0557.1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:DACACGCGCG--
CTCACGCGCTCA
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G A C G T A C G T
G A T C G C A T T A G C G C T A G A T C A T C G A G T C C T A G T G A C A G C T G A T C C G T A

CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:DACACGCGCG
WWAACGCGTT
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G
G C T A G C T A G C T A T C G A G T A C C T A G G A T C A C T G A C G T C A G T

CMTA2/MA0969.1/Jaspar

Match Rank:5
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:DACACGCGCG--
---ACGCGGNNN
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T G C A G T A C C T A G A G T C C A T G A T C G G A C T C G A T G C A T

Tp_0225(RRM)/Thalassiosira_pseudonana-RNCMPT00225-PBM/HughesRNA

Match Rank:6
Score:0.84
Offset:2
Orientation:forward strand
Alignment:DACACGCGCG
--AACACGC-
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G
A C G T A C G T G C T A G T C A T A G C C T G A A G T C A C T G A G T C A C G T

CAMTA1/MA1197.1/Jaspar

Match Rank:7
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:DACACGCGCG--
NNCACGCGCTTT
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G A C G T A C G T
G A C T G C A T G T A C G T C A A G T C C T A G A G T C A C T G A G T C G A C T C G A T G C A T

FAR1/MA1382.1/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--DACACGCGCG---
ACCTCACGCGCCTCC
 A C G T A C G T C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G A C G T A C G T A C G T
G C T A G A T C G A T C G A C T A T G C C G T A A G T C A C T G A G T C A C T G A G T C A G T C C A G T G A T C G A T C

MBP1/MA0329.1/Jaspar

Match Rank:9
Score:0.82
Offset:3
Orientation:forward strand
Alignment:DACACGCGCG
---ACGCGTA
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G
A C G T A C G T A C G T C T G A A G T C C T A G A G T C A T C G G C A T G T C A

RSC3/MA0374.1/Jaspar

Match Rank:10
Score:0.82
Offset:4
Orientation:forward strand
Alignment:DACACGCGCG-
----CGCGCGG
 C T A G G T C A G T A C C T G A G T A C T C A G T A G C C T A G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A T G C A C T G A G T C A C T G A G T C T A C G T A C G