Information for 7-AAACGRCGTCGT (Motif 4)

G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T
Reverse Opposite:
T C G A A G T C A T C G C T G A G A T C C T A G G A C T G T A C C T A G A C G T C G A T C G A T
p-value:1e-92
log p-value:-2.139e+02
Information Content per bp:1.736
Number of Target Sequences with motif362.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif290.2
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets49.7 +/- 24.7bp
Average Position of motif in Background54.6 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown2/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:AAACGRCGTCGT---
AAACGACGTCGTTTT
 G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T A C G T A C G T A C G T
G C T A G C T A T G C A A G T C C T A G C T G A G A T C C T A G G A C T G A T C C T A G A C G T C G A T C G A T G A C T

AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAACGRCGTCGT
NDWCGAHDTCGW
 G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T
G C T A C G T A G C A T G A T C C T A G C G T A G C A T C G T A G C A T A G T C C T A G C G T A

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AAACGRCGTCGT-
-----TCGTCGTN
 G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G C T A G T C A C T G A G C T A G C T

UPC2/MA0411.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAACGRCGTCGT
TATACGA------
 A C G T G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T
A G C T C T G A C G A T C G T A A G T C C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAACGRCGTCGT---
TNAACGACGTCGNCCA
 A C G T G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAACGRCGTCGT
-----TCGTCGT
 G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T A G T C A C T G A C G T

SRSF7(RRM,Znf)/Homo_sapiens-RNCMPT00073-PBM/HughesRNA

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAACGRCGTCGT-
-----NCGTCGTC
 G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C A C T G A C G T A G T C

STP2/MA0395.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAACGRCGTCGT-------
TGATCGGCGCCGCACGACGA
 A C G T G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G T C G A G C A T A G T C T C A G C T A G G A T C A T C G A T G C A T G C A C T G G A T C C T G A A G T C T A C G G T C A G T A C A C T G G C T A

LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAACGRCGTCGT-
---CDCCGCCGTC
 G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T A C G T
A C G T A C G T A C G T G A T C C A G T T A G C A G T C A C T G A G T C A G T C C T A G G A C T G T A C

Os05g0497200/MA1034.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAACGRCGTCGT
---CGCCGCCA-
 G C T A G C T A T G C A A G T C A C T G C T G A A G T C C T A G G A C T T A G C A C T G A G C T
A C G T A C G T A C G T A G T C A C T G A T G C A G T C A C T G A G T C A G T C C T A G A C G T