Information for 4-CSGTTHRATY (Motif 3)

A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
Reverse Opposite:
C T G A G C T A G A C T G A C T C T A G C T G A C G T A A G T C A T G C A C T G
p-value:1e-131
log p-value:-3.039e+02
Information Content per bp:1.636
Number of Target Sequences with motif1286.0
Percentage of Target Sequences with motif11.00%
Number of Background Sequences with motif1805.0
Percentage of Background Sequences with motif5.25%
Average Position of motif in Targets50.1 +/- 26.5bp
Average Position of motif in Background49.9 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CSGTTHRATY
CCGGTTTART-
 A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
G A T C A T G C A T C G C A T G A C G T G A C T G A C T C T G A C T G A G C A T A C G T

MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----CSGTTHRATY
NDHDDCNGTTDNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
C G A T C G A T G C A T C G T A C G T A A G T C T C A G A C T G A C G T A C G T C G T A C G T A C G A T C G A T C G A T

MYB1/MA1179.1/Jaspar

Match Rank:3
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----CSGTTHRATY-----
ATTACCGTTAAAGTTGTTA
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C G A T C T G A A G T C T A G C A C T G A C G T A C G T C G T A C G T A C G T A C A T G G C A T G A C T A T C G C A G T G C A T C G T A

MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----CSGTTHRATY
NNWAWCSGTTWN---
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
G A C T C T A G C G A T C G T A C G T A A G T C T A C G A C T G A C G T G C A T C G T A A G T C A C G T A C G T A C G T

ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------CSGTTHRATY
TCTYRACCGTYSGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
A G C T G T A C G C A T A G C T T C G A C T G A A G T C A G T C A C T G A C G T G A C T T A G C C T A G C G T A G A C T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CSGTTHRATY
BRRCVGTTDN---
 A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CSGTTHRATY
RACNGTTA----
 A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
C T G A C G T A A G T C T A G C A C T G A C G T G C A T G C T A A C G T A C G T A C G T A C G T

MYB65/MA1177.1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CSGTTHRATY
TTACGGTTANNGT
 A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
G C A T C A G T C G T A A G T C T A C G A C T G A C G T A C G T C G T A A G T C C T A G C T A G G C A T

ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CSGTTHRATY
ATCWYRACCGTTSRW--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
G C T A A G C T G T A C G C A T A G C T T C G A C T G A A G T C A G T C T A C G A C G T G A C T T A C G C T A G C G T A A C G T A C G T

MYB77/MA1395.1/Jaspar

Match Rank:10
Score:0.70
Offset:-9
Orientation:forward strand
Alignment:---------CSGTTHRATY
CGGTTATGACGGTTA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G C G A T G A C T G A T C C T G A C T G A C G A T G A C T
G A T C C A T G C T A G C G A T C G A T C G T A G C A T C T A G C T G A G A T C T A C G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T