Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 173)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 43419)	% of Background Sequences with Motif
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e-21	-4.900e+01	0.0000	48.0	27.75%	2257.8	5.20%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e-20	-4.680e+01	0.0000	54.0	31.21%	3080.9	7.09%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e-19	-4.454e+01	0.0000	48.0	27.75%	2517.8	5.80%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e-18	-4.277e+01	0.0000	42.0	24.28%	1961.6	4.52%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e-18	-4.201e+01	0.0000	42.0	24.28%	2003.7	4.61%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e-18	-4.151e+01	0.0000	45.0	26.01%	2363.7	5.44%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e-17	-4.070e+01	0.0000	42.0	24.28%	2078.8	4.79%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e-17	-3.989e+01	0.0000	40.0	23.12%	1909.7	4.40%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e-17	-3.950e+01	0.0000	44.0	25.43%	2376.1	5.47%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e-16	-3.848e+01	0.0000	40.0	23.12%	1991.0	4.58%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e-16	-3.788e+01	0.0000	36.0	20.81%	1604.8	3.69%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e-14	-3.404e+01	0.0000	60.0	34.68%	5034.5	11.59%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e-13	-3.060e+01	0.0000	32.0	18.50%	1592.9	3.67%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e-13	-3.044e+01	0.0000	34.0	19.65%	1822.1	4.20%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e-11	-2.597e+01	0.0000	32.0	18.50%	1898.5	4.37%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e-11	-2.588e+01	0.0000	52.0	30.06%	4730.5	10.89%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-10	-2.451e+01	0.0000	34.0	19.65%	2262.5	5.21%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-10	-2.392e+01	0.0000	33.0	19.08%	2183.5	5.03%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-10	-2.310e+01	0.0000	38.0	21.97%	2934.3	6.76%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-9	-2.248e+01	0.0000	27.0	15.61%	1562.7	3.60%
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer	DGCACACGTG	1e-9	-2.239e+01	0.0000	38.0	21.97%	3008.3	6.93%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e-9	-2.199e+01	0.0000	32.0	18.50%	2222.6	5.12%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e-9	-2.120e+01	0.0000	21.0	12.14%	988.1	2.27%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e-9	-2.088e+01	0.0000	21.0	12.14%	1006.8	2.32%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e-8	-2.067e+01	0.0000	26.0	15.03%	1577.1	3.63%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e-8	-2.013e+01	0.0000	25.0	14.45%	1499.5	3.45%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e-8	-1.981e+01	0.0000	34.0	19.65%	2711.6	6.24%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-8	-1.973e+01	0.0000	41.0	23.70%	3774.8	8.69%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e-8	-1.969e+01	0.0000	25.0	14.45%	1532.4	3.53%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-8	-1.949e+01	0.0000	48.0	27.75%	4954.1	11.41%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e-8	-1.898e+01	0.0000	12.0	6.94%	308.5	0.71%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e-8	-1.895e+01	0.0000	43.0	24.86%	4201.4	9.67%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e-8	-1.863e+01	0.0000	12.0	6.94%	318.2	0.73%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-8	-1.845e+01	0.0000	31.0	17.92%	2431.7	5.60%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e-7	-1.787e+01	0.0000	22.0	12.72%	1314.8	3.03%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-7	-1.724e+01	0.0000	20.0	11.56%	1128.5	2.60%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e-7	-1.694e+01	0.0000	36.0	20.81%	3357.5	7.73%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e-7	-1.689e+01	0.0000	17.0	9.83%	827.0	1.90%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-7	-1.636e+01	0.0000	28.0	16.18%	2232.2	5.14%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-6	-1.599e+01	0.0000	45.0	26.01%	5004.2	11.52%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e-6	-1.539e+01	0.0000	77.0	44.51%	11453.4	26.37%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-6	-1.537e+01	0.0000	23.0	13.29%	1649.3	3.80%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-6	-1.536e+01	0.0000	42.0	24.28%	4588.6	10.56%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e-6	-1.529e+01	0.0000	17.0	9.83%	926.7	2.13%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e-6	-1.437e+01	0.0000	16.0	9.25%	878.0	2.02%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e-5	-1.330e+01	0.0000	12.0	6.94%	526.7	1.21%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e-5	-1.281e+01	0.0001	9.0	5.20%	286.9	0.66%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e-5	-1.246e+01	0.0001	6.0	3.47%	101.7	0.23%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e-4	-1.104e+01	0.0003	27.0	15.61%	2775.9	6.39%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-4	-1.093e+01	0.0004	22.0	12.72%	2004.6	4.62%
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer	NCYAATAAAA	1e-4	-1.033e+01	0.0006	31.0	17.92%	3573.9	8.23%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e-4	-9.815e+00	0.0011	7.0	4.05%	238.2	0.55%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e-4	-9.608e+00	0.0013	17.0	9.83%	1432.8	3.30%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e-4	-9.358e+00	0.0016	12.0	6.94%	787.9	1.81%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e-3	-9.175e+00	0.0019	7.0	4.05%	264.0	0.61%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e-3	-9.121e+00	0.0020	9.0	5.20%	460.8	1.06%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e-3	-8.697e+00	0.0029	23.0	13.29%	2501.6	5.76%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-3	-8.582e+00	0.0033	23.0	13.29%	2521.9	5.81%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-3	-8.574e+00	0.0033	46.0	26.59%	6849.8	15.77%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e-3	-8.438e+00	0.0036	12.0	6.94%	870.6	2.00%
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer	KCACGTGMCN	1e-3	-7.862e+00	0.0064	28.0	16.18%	3542.7	8.16%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e-3	-7.626e+00	0.0079	8.0	4.62%	449.3	1.03%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e-3	-7.552e+00	0.0084	15.0	8.67%	1398.0	3.22%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e-3	-7.415e+00	0.0095	25.0	14.45%	3096.6	7.13%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-3	-7.366e+00	0.0098	5.0	2.89%	169.1	0.39%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e-3	-7.142e+00	0.0121	8.0	4.62%	484.9	1.12%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-6.824e+00	0.0163	41.0	23.70%	6365.2	14.65%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e-2	-6.756e+00	0.0172	4.0	2.31%	113.4	0.26%
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer	VGCCATAAAA	1e-2	-6.723e+00	0.0175	38.0	21.97%	5783.0	13.31%
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer	CYHATAAAAN	1e-2	-6.656e+00	0.0185	38.0	21.97%	5804.2	13.36%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e-2	-6.586e+00	0.0195	45.0	26.01%	7281.8	16.76%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e-2	-6.462e+00	0.0218	9.0	5.20%	668.4	1.54%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e-2	-6.447e+00	0.0218	4.0	2.31%	123.4	0.28%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e-2	-6.349e+00	0.0238	29.0	16.76%	4104.7	9.45%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-2	-6.222e+00	0.0266	33.0	19.08%	4929.6	11.35%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e-2	-6.183e+00	0.0273	29.0	16.76%	4150.2	9.55%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e-2	-6.178e+00	0.0273	15.0	8.67%	1607.0	3.70%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-2	-6.130e+00	0.0281	29.0	16.76%	4165.1	9.59%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e-2	-6.062e+00	0.0297	17.0	9.83%	1964.8	4.52%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e-2	-6.015e+00	0.0307	11.0	6.36%	1002.4	2.31%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e-2	-5.887e+00	0.0345	7.0	4.05%	464.7	1.07%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e-2	-5.879e+00	0.0345	26.0	15.03%	3653.5	8.41%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e-2	-5.876e+00	0.0345	38.0	21.97%	6063.5	13.96%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-2	-5.863e+00	0.0345	19.0	10.98%	2355.9	5.42%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e-2	-5.735e+00	0.0383	12.0	6.94%	1195.7	2.75%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e-2	-5.615e+00	0.0426	18.0	10.40%	2230.9	5.14%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e-2	-5.612e+00	0.0426	16.0	9.25%	1879.9	4.33%
RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer	CYAAAAWWGG	1e-2	-5.570e+00	0.0435	17.0	9.83%	2062.7	4.75%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e-2	-5.537e+00	0.0445	27.0	15.61%	3944.6	9.08%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e-2	-5.490e+00	0.0461	19.0	10.98%	2438.6	5.61%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-2	-5.369e+00	0.0515	18.0	10.40%	2284.9	5.26%
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer	RGCAATNAAA	1e-2	-5.341e+00	0.0524	39.0	22.54%	6468.2	14.89%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e-2	-5.218e+00	0.0586	24.0	13.87%	3450.2	7.94%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e-2	-5.212e+00	0.0586	6.0	3.47%	397.1	0.91%
Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer	SSRGCAGCTGCH	1e-2	-5.128e+00	0.0628	10.0	5.78%	972.5	2.24%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e-2	-5.022e+00	0.0691	12.0	6.94%	1310.4	3.02%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e-2	-5.004e+00	0.0696	16.0	9.25%	2005.8	4.62%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-2	-5.001e+00	0.0696	14.0	8.09%	1653.4	3.81%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e-2	-4.975e+00	0.0702	23.0	13.29%	3325.1	7.66%
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer	TTTTATGGCM	1e-2	-4.923e+00	0.0732	35.0	20.23%	5782.4	13.31%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e-2	-4.913e+00	0.0732	29.0	16.76%	4541.0	10.45%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e-2	-4.874e+00	0.0754	17.0	9.83%	2216.8	5.10%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e-2	-4.865e+00	0.0754	23.0	13.29%	3357.9	7.73%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e-2	-4.861e+00	0.0754	16.0	9.25%	2037.4	4.69%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e-2	-4.857e+00	0.0754	14.0	8.09%	1682.8	3.87%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e-2	-4.831e+00	0.0757	5.0	2.89%	306.2	0.71%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e-2	-4.830e+00	0.0757	9.0	5.20%	860.1	1.98%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e-2	-4.818e+00	0.0757	5.0	2.89%	308.0	0.71%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e-2	-4.766e+00	0.0786	19.0	10.98%	2615.8	6.02%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e-2	-4.732e+00	0.0806	24.0	13.87%	3595.0	8.28%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e-2	-4.732e+00	0.0806	33.0	19.08%	5434.8	12.51%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e-2	-4.682e+00	0.0831	32.0	18.50%	5243.7	12.07%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e-2	-4.669e+00	0.0835	16.0	9.25%	2081.4	4.79%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-2	-4.648e+00	0.0845	19.0	10.98%	2647.0	6.09%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e-2	-4.636e+00	0.0849	14.0	8.09%	1728.7	3.98%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e-1	-4.580e+00	0.0889	3.0	1.73%	111.6	0.26%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e-1	-4.563e+00	0.0897	18.0	10.40%	2480.0	5.71%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e-1	-4.491e+00	0.0956	18.0	10.40%	2498.2	5.75%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e-1	-4.428e+00	0.1009	39.0	22.54%	6841.9	15.75%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e-1	-4.424e+00	0.1009	14.0	8.09%	1774.3	4.08%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e-1	-4.409e+00	0.1011	9.0	5.20%	922.9	2.12%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e-1	-4.365e+00	0.1049	29.0	16.76%	4736.5	10.90%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e-1	-4.334e+00	0.1073	26.0	15.03%	4128.0	9.50%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-1	-4.316e+00	0.1083	12.0	6.94%	1442.6	3.32%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e-1	-4.296e+00	0.1097	11.0	6.36%	1273.0	2.93%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e-1	-4.289e+00	0.1097	23.0	13.29%	3535.1	8.14%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e-1	-4.284e+00	0.1097	15.0	8.67%	1989.3	4.58%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e-1	-4.271e+00	0.1098	39.0	22.54%	6911.3	15.91%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-1	-4.222e+00	0.1144	3.0	1.73%	127.0	0.29%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-4.186e+00	0.1177	36.0	20.81%	6296.9	14.50%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e-1	-4.185e+00	0.1177	12.0	6.94%	1469.9	3.38%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-4.181e+00	0.1177	3.0	1.73%	129.3	0.30%
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer	NDCTAATTAS	1e-1	-4.179e+00	0.1177	32.0	18.50%	5440.7	12.53%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e-1	-4.175e+00	0.1177	14.0	8.09%	1831.8	4.22%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e-1	-4.151e+00	0.1177	17.0	9.83%	2399.2	5.52%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-4.074e+00	0.1258	8.0	4.62%	814.6	1.88%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e-1	-4.023e+00	0.1314	18.0	10.40%	2628.5	6.05%
SeqBias: A/T bias	WWWWWWWWWW	1e-1	-4.008e+00	0.1325	152.0	87.86%	35459.9	81.64%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e-1	-3.982e+00	0.1350	36.0	20.81%	6387.8	14.71%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e-1	-3.929e+00	0.1412	28.0	16.18%	4694.5	10.81%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e-1	-3.924e+00	0.1412	13.0	7.51%	1707.4	3.93%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e-1	-3.917e+00	0.1412	40.0	23.12%	7297.6	16.80%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e-1	-3.879e+00	0.1454	10.0	5.78%	1181.3	2.72%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-1	-3.859e+00	0.1474	16.0	9.25%	2288.9	5.27%
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer	SMCATCTGKH	1e-1	-3.848e+00	0.1479	13.0	7.51%	1725.1	3.97%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e-1	-3.808e+00	0.1529	21.0	12.14%	3292.7	7.58%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e-1	-3.806e+00	0.1529	3.0	1.73%	149.6	0.34%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-1	-3.800e+00	0.1529	19.0	10.98%	2893.9	6.66%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-1	-3.783e+00	0.1537	10.0	5.78%	1200.6	2.76%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-1	-3.749e+00	0.1579	2.0	1.16%	59.1	0.14%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e-1	-3.699e+00	0.1648	6.0	3.47%	556.3	1.28%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-3.654e+00	0.1713	6.0	3.47%	562.9	1.30%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e-1	-3.637e+00	0.1731	37.0	21.39%	6770.5	15.59%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e-1	-3.635e+00	0.1731	29.0	16.76%	5029.0	11.58%
TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer	CCAAAAATRG	1e-1	-3.534e+00	0.1894	15.0	8.67%	2187.4	5.04%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e-1	-3.503e+00	0.1941	10.0	5.78%	1258.5	2.90%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e-1	-3.458e+00	0.2017	30.0	17.34%	5322.1	12.25%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e-1	-3.396e+00	0.2134	44.0	25.43%	8470.6	19.50%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e-1	-3.396e+00	0.2134	6.0	3.47%	598.5	1.38%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e-1	-3.271e+00	0.2387	24.0	13.87%	4117.6	9.48%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e-1	-3.247e+00	0.2431	48.0	27.75%	9475.6	21.82%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e-1	-3.240e+00	0.2431	25.0	14.45%	4343.9	10.00%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-1	-3.191e+00	0.2538	8.0	4.62%	968.9	2.23%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-3.163e+00	0.2596	26.0	15.03%	4592.4	10.57%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e-1	-3.136e+00	0.2649	5.0	2.89%	478.5	1.10%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e-1	-3.134e+00	0.2649	21.0	12.14%	3540.7	8.15%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e-1	-3.134e+00	0.2649	18.0	10.40%	2917.9	6.72%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e-1	-3.122e+00	0.2649	15.0	8.67%	2313.3	5.33%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e-1	-3.082e+00	0.2731	25.0	14.45%	4413.0	10.16%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e-1	-3.081e+00	0.2731	26.0	15.03%	4629.1	10.66%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e-1	-3.064e+00	0.2746	1.0	0.58%	12.6	0.03%
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer	NSNNTAATTA	1e-1	-3.037e+00	0.2806	23.0	13.29%	4004.1	9.22%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e-1	-3.024e+00	0.2828	34.0	19.65%	6420.2	14.78%
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer	NNNTAATTAS	1e-1	-3.009e+00	0.2852	25.0	14.45%	4446.2	10.24%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e-1	-3.007e+00	0.2852	18.0	10.40%	2964.4	6.82%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e-1	-3.004e+00	0.2852	18.0	10.40%	2965.2	6.83%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e-1	-3.001e+00	0.2852	17.0	9.83%	2760.6	6.36%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-2.976e+00	0.2883	9.0	5.20%	1195.4	2.75%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-2.972e+00	0.2883	3.0	1.73%	208.1	0.48%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e-1	-2.971e+00	0.2883	16.0	9.25%	2566.1	5.91%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e-1	-2.913e+00	0.3020	9.0	5.20%	1210.7	2.79%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e-1	-2.884e+00	0.3092	4.0	2.31%	358.6	0.83%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e-1	-2.878e+00	0.3092	21.0	12.14%	3646.9	8.40%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e-1	-2.856e+00	0.3142	11.0	6.36%	1605.2	3.70%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-1	-2.843e+00	0.3168	13.0	7.51%	2003.0	4.61%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-2.843e+00	0.3168	45.0	26.01%	9037.0	20.81%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e-1	-2.838e+00	0.3168	8.0	4.62%	1043.1	2.40%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e-1	-2.820e+00	0.3189	30.0	17.34%	5637.0	12.98%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1	-2.816e+00	0.3189	7.0	4.05%	867.3	2.00%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e-1	-2.802e+00	0.3212	13.0	7.51%	2016.4	4.64%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1	-2.798e+00	0.3212	8.0	4.62%	1052.2	2.42%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e-1	-2.770e+00	0.3284	12.0	6.94%	1828.0	4.21%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e-1	-2.765e+00	0.3284	28.0	16.18%	5222.2	12.02%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e-1	-2.756e+00	0.3294	34.0	19.65%	6570.3	15.13%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e-1	-2.754e+00	0.3294	7.0	4.05%	880.2	2.03%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e-1	-2.725e+00	0.3365	8.0	4.62%	1069.1	2.46%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-2.678e+00	0.3507	13.0	7.51%	2057.1	4.74%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e-1	-2.644e+00	0.3612	5.0	2.89%	552.7	1.27%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e-1	-2.639e+00	0.3612	18.0	10.40%	3110.3	7.16%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e-1	-2.635e+00	0.3612	11.0	6.36%	1670.7	3.85%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e-1	-2.633e+00	0.3612	10.0	5.78%	1474.9	3.40%
SeqBias: GA-repeat	GAGAGAGAGA	1e-1	-2.627e+00	0.3612	59.0	34.10%	12489.1	28.75%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e-1	-2.605e+00	0.3661	10.0	5.78%	1482.4	3.41%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-2.597e+00	0.3675	7.0	4.05%	914.4	2.11%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e-1	-2.574e+00	0.3740	7.0	4.05%	919.7	2.12%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e-1	-2.559e+00	0.3777	15.0	8.67%	2511.5	5.78%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e-1	-2.557e+00	0.3777	2.0	1.16%	115.6	0.27%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e-1	-2.549e+00	0.3782	20.0	11.56%	3578.7	8.24%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-1	-2.544e+00	0.3782	10.0	5.78%	1500.1	3.45%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e-1	-2.543e+00	0.3782	7.0	4.05%	926.3	2.13%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e-1	-2.469e+00	0.4035	16.0	9.25%	2757.9	6.35%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-1	-2.468e+00	0.4035	4.0	2.31%	414.1	0.95%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e-1	-2.464e+00	0.4035	22.0	12.72%	4054.5	9.33%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e-1	-2.459e+00	0.4035	18.0	10.40%	3188.3	7.34%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e-1	-2.427e+00	0.4130	15.0	8.67%	2563.0	5.90%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e-1	-2.411e+00	0.4178	25.0	14.45%	4745.9	10.93%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e-1	-2.401e+00	0.4201	17.0	9.83%	2999.1	6.90%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-2.373e+00	0.4303	53.0	30.64%	11256.4	25.92%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-1	-2.370e+00	0.4303	4.0	2.31%	429.0	0.99%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e-1	-2.368e+00	0.4303	19.0	10.98%	3446.4	7.93%
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer	TRCATTCCAG	1e0	-2.283e+00	0.4641	11.0	6.36%	1785.3	4.11%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-2.246e+00	0.4796	19.0	10.98%	3505.6	8.07%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	-2.246e+00	0.4796	34.0	19.65%	6890.6	15.86%
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer	NGCTAATTAG	1e0	-2.206e+00	0.4945	20.0	11.56%	3746.0	8.62%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-2.206e+00	0.4945	17.0	9.83%	3088.9	7.11%
SeqBias: polyC-repeat	CCCCCCCCCC	1e0	-2.195e+00	0.4959	160.0	92.49%	38824.1	89.38%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e0	-2.194e+00	0.4959	13.0	7.51%	2235.2	5.15%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e0	-2.183e+00	0.4973	7.0	4.05%	1015.2	2.34%
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer	AAWCTAGGTCARDNN	1e0	-2.169e+00	0.5023	2.0	1.16%	145.2	0.33%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e0	-2.153e+00	0.5078	7.0	4.05%	1023.9	2.36%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e0	-2.153e+00	0.5078	5.0	2.89%	644.7	1.48%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e0	-2.153e+00	0.5078	1.0	0.58%	31.2	0.07%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	-2.141e+00	0.5078	36.0	20.81%	7427.5	17.10%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e0	-2.130e+00	0.5107	3.0	1.73%	300.3	0.69%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-2.124e+00	0.5116	4.0	2.31%	470.8	1.08%
HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer	TGCCAGCB	1e0	-2.098e+00	0.5228	11.0	6.36%	1852.9	4.27%
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer	CHCAGCRGGRGG	1e0	-2.092e+00	0.5240	2.0	1.16%	152.9	0.35%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e0	-2.089e+00	0.5240	34.0	19.65%	6999.6	16.11%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.065e+00	0.5341	5.0	2.89%	663.3	1.53%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-2.064e+00	0.5341	4.0	2.31%	481.8	1.11%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e0	-2.059e+00	0.5341	6.0	3.47%	854.1	1.97%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-2.033e+00	0.5443	5.0	2.89%	670.9	1.54%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e0	-2.019e+00	0.5495	24.0	13.87%	4747.2	10.93%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e0	-2.006e+00	0.5544	62.0	35.84%	13740.1	31.63%
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer	VTTACGTAAYNNNNN	1e0	-1.975e+00	0.5700	11.0	6.36%	1900.7	4.38%
SeqBias: C/A-bias	MMMMMMMMMM	1e0	-1.971e+00	0.5700	170.0	98.27%	41908.3	96.48%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.970e+00	0.5700	2.0	1.16%	164.2	0.38%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.960e+00	0.5712	13.0	7.51%	2334.2	5.37%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.941e+00	0.5800	2.0	1.16%	167.9	0.39%
Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer	AGGTGTGAAA	1e0	-1.940e+00	0.5800	11.0	6.36%	1914.9	4.41%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e0	-1.928e+00	0.5832	8.0	4.62%	1291.6	2.97%
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer	SSTAATTA	1e0	-1.920e+00	0.5852	13.0	7.51%	2352.3	5.42%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e0	-1.920e+00	0.5852	20.0	11.56%	3902.4	8.98%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.916e+00	0.5852	27.0	15.61%	5500.1	12.66%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.908e+00	0.5855	20.0	11.56%	3910.0	9.00%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.890e+00	0.5936	28.0	16.18%	5749.9	13.24%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e0	-1.888e+00	0.5936	5.0	2.89%	704.1	1.62%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-1.884e+00	0.5936	7.0	4.05%	1101.1	2.53%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e0	-1.875e+00	0.5956	15.0	8.67%	2811.2	6.47%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e0	-1.871e+00	0.5957	14.0	8.09%	2593.3	5.97%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e0	-1.870e+00	0.5957	1.0	0.58%	42.6	0.10%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e0	-1.848e+00	0.6047	1.0	0.58%	43.4	0.10%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e0	-1.839e+00	0.6078	16.0	9.25%	3051.9	7.03%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e0	-1.837e+00	0.6078	26.0	15.03%	5325.0	12.26%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.832e+00	0.6079	4.0	2.31%	527.4	1.21%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.823e+00	0.6085	2.0	1.16%	180.3	0.42%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.823e+00	0.6085	2.0	1.16%	180.3	0.42%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.816e+00	0.6109	23.0	13.29%	4648.5	10.70%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	-1.812e+00	0.6110	6.0	3.47%	921.3	2.12%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	-1.792e+00	0.6207	20.0	11.56%	3978.0	9.16%
Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer	GATTTGCATA	1e0	-1.790e+00	0.6207	4.0	2.31%	536.3	1.23%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e0	-1.788e+00	0.6207	6.0	3.47%	928.3	2.14%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.785e+00	0.6207	4.0	2.31%	537.3	1.24%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	-1.774e+00	0.6227	16.0	9.25%	3086.5	7.11%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-1.770e+00	0.6233	10.0	5.78%	1770.0	4.08%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e0	-1.768e+00	0.6233	19.0	10.98%	3766.7	8.67%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-1.767e+00	0.6233	1.0	0.58%	47.4	0.11%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e0	-1.754e+00	0.6264	37.0	21.39%	7964.3	18.34%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e0	-1.753e+00	0.6264	7.0	4.05%	1143.0	2.63%
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer	CYRCATTCCA	1e0	-1.741e+00	0.6301	8.0	4.62%	1356.1	3.12%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-1.737e+00	0.6301	6.0	3.47%	943.8	2.17%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	-1.728e+00	0.6338	13.0	7.51%	2443.5	5.63%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e0	-1.721e+00	0.6362	25.0	14.45%	5174.1	11.91%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e0	-1.720e+00	0.6362	5.0	2.89%	747.4	1.72%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e0	-1.706e+00	0.6408	11.0	6.36%	2014.9	4.64%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e0	-1.695e+00	0.6458	6.0	3.47%	957.0	2.20%
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer	CTCCCTGGGAGGCCN	1e0	-1.692e+00	0.6458	4.0	2.31%	558.0	1.28%
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer	NDGTAATTAC	1e0	-1.660e+00	0.6644	10.0	5.78%	1817.7	4.18%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	-1.654e+00	0.6657	11.0	6.36%	2038.4	4.69%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e0	-1.653e+00	0.6657	13.0	7.51%	2481.6	5.71%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	-1.639e+00	0.6711	2.0	1.16%	203.8	0.47%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e0	-1.635e+00	0.6719	12.0	6.94%	2268.3	5.22%
Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer	DAGGTGTBAA	1e0	-1.630e+00	0.6725	10.0	5.78%	1830.3	4.21%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e0	-1.629e+00	0.6725	16.0	9.25%	3168.7	7.30%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-1.606e+00	0.6841	7.0	4.05%	1194.6	2.75%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.603e+00	0.6842	2.0	1.16%	208.2	0.48%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	-1.597e+00	0.6862	4.0	2.31%	581.2	1.34%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.593e+00	0.6866	7.0	4.05%	1199.1	2.76%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.586e+00	0.6890	6.0	3.47%	992.0	2.28%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e0	-1.584e+00	0.6890	8.0	4.62%	1416.3	3.26%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e0	-1.580e+00	0.6890	6.0	3.47%	993.8	2.29%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	-1.566e+00	0.6956	11.0	6.36%	2080.8	4.79%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e0	-1.561e+00	0.6972	2.0	1.16%	214.7	0.49%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.548e+00	0.7037	12.0	6.94%	2312.6	5.32%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-1.544e+00	0.7045	18.0	10.40%	3678.5	8.47%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e0	-1.540e+00	0.7047	2.0	1.16%	217.5	0.50%
Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer	CTTTGATGTGSB	1e0	-1.534e+00	0.7070	4.0	2.31%	597.4	1.38%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.533e+00	0.7070	1.0	0.58%	61.9	0.14%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e0	-1.522e+00	0.7106	14.0	8.09%	2777.1	6.39%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e0	-1.520e+00	0.7106	11.0	6.36%	2103.4	4.84%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	-1.519e+00	0.7106	1.0	0.58%	62.5	0.14%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	-1.507e+00	0.7142	7.0	4.05%	1231.3	2.83%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e0	-1.507e+00	0.7142	4.0	2.31%	604.3	1.39%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e0	-1.502e+00	0.7142	5.0	2.89%	810.6	1.87%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	-1.500e+00	0.7142	2.0	1.16%	223.8	0.52%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.494e+00	0.7149	2.0	1.16%	224.8	0.52%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e0	-1.485e+00	0.7191	11.0	6.36%	2121.9	4.89%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e0	-1.483e+00	0.7191	28.0	16.18%	6061.6	13.96%
TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer	AGATAAGANN	1e0	-1.476e+00	0.7205	26.0	15.03%	5594.7	12.88%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e0	-1.472e+00	0.7211	16.0	9.25%	3264.9	7.52%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.465e+00	0.7240	3.0	1.73%	416.1	0.96%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e0	-1.464e+00	0.7240	9.0	5.20%	1686.1	3.88%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e0	-1.463e+00	0.7240	18.0	10.40%	3732.6	8.59%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e0	-1.424e+00	0.7477	25.0	14.45%	5401.9	12.44%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-1.407e+00	0.7581	6.0	3.47%	1054.1	2.43%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.388e+00	0.7704	13.0	7.51%	2628.6	6.05%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-1.380e+00	0.7742	8.0	4.62%	1503.7	3.46%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.377e+00	0.7742	2.0	1.16%	243.1	0.56%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.376e+00	0.7742	14.0	8.09%	2865.1	6.60%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.371e+00	0.7742	21.0	12.14%	4500.1	10.36%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e0	-1.347e+00	0.7902	20.0	11.56%	4283.4	9.86%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.345e+00	0.7902	11.0	6.36%	2196.3	5.06%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e0	-1.344e+00	0.7902	15.0	8.67%	3117.2	7.18%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e0	-1.326e+00	0.7996	6.0	3.47%	1085.1	2.50%
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer	TTAACCCTTTVNKKN	1e0	-1.316e+00	0.8051	3.0	1.73%	451.4	1.04%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	-1.316e+00	0.8051	6.0	3.47%	1089.0	2.51%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	-1.309e+00	0.8064	8.0	4.62%	1536.5	3.54%
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer	VVRRAACAATGG	1e0	-1.307e+00	0.8064	4.0	2.31%	661.3	1.52%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	-1.305e+00	0.8064	13.0	7.51%	2679.2	6.17%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e0	-1.301e+00	0.8064	14.0	8.09%	2913.2	6.71%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-1.301e+00	0.8064	11.0	6.36%	2221.6	5.11%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e0	-1.293e+00	0.8072	2.0	1.16%	258.6	0.60%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e0	-1.289e+00	0.8083	17.0	9.83%	3622.7	8.34%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-1.286e+00	0.8083	8.0	4.62%	1547.8	3.56%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.284e+00	0.8083	5.0	2.89%	883.9	2.03%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e0	-1.282e+00	0.8083	60.0	34.68%	14037.4	32.32%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.277e+00	0.8083	1.0	0.58%	82.5	0.19%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	-1.277e+00	0.8083	1.0	0.58%	82.2	0.19%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	-1.267e+00	0.8121	1.0	0.58%	83.4	0.19%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e0	-1.264e+00	0.8125	8.0	4.62%	1558.9	3.59%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.262e+00	0.8125	3.0	1.73%	465.9	1.07%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e0	-1.259e+00	0.8125	9.0	5.20%	1787.3	4.11%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e0	-1.258e+00	0.8125	12.0	6.94%	2477.1	5.70%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.247e+00	0.8145	1.0	0.58%	85.4	0.20%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.247e+00	0.8145	1.0	0.58%	85.4	0.20%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e0	-1.231e+00	0.8254	50.0	28.90%	11641.2	26.80%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-1.218e+00	0.8333	9.0	5.20%	1809.2	4.17%
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer	HAWGRGGCCM	1e0	-1.218e+00	0.8333	10.0	5.78%	2039.8	4.70%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.211e+00	0.8348	2.0	1.16%	274.8	0.63%
SeqBias: polyA-repeat	AAAAAAAAAA	1e0	-1.207e+00	0.8356	172.0	99.42%	42824.6	98.59%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-1.202e+00	0.8376	5.0	2.89%	914.6	2.11%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e0	-1.196e+00	0.8400	6.0	3.47%	1139.3	2.62%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e0	-1.192e+00	0.8418	2.0	1.16%	278.8	0.64%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e0	-1.182e+00	0.8471	27.0	15.61%	6096.6	14.04%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e0	-1.181e+00	0.8471	17.0	9.83%	3704.9	8.53%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.181e+00	0.8471	1.0	0.58%	92.4	0.21%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.172e+00	0.8495	9.0	5.20%	1835.8	4.23%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e0	-1.171e+00	0.8495	3.0	1.73%	491.0	1.13%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.168e+00	0.8495	11.0	6.36%	2301.3	5.30%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.167e+00	0.8495	4.0	2.31%	707.6	1.63%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.161e+00	0.8496	10.0	5.78%	2073.3	4.77%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	-1.159e+00	0.8496	5.0	2.89%	931.5	2.14%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.156e+00	0.8496	7.0	4.05%	1384.3	3.19%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.154e+00	0.8496	1.0	0.58%	96.0	0.22%
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer	GGCMATGAAA	1e0	-1.154e+00	0.8496	11.0	6.36%	2310.2	5.32%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.151e+00	0.8496	49.0	28.32%	11495.4	26.47%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	-1.145e+00	0.8496	6.0	3.47%	1162.2	2.68%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e0	-1.145e+00	0.8496	2.0	1.16%	288.6	0.66%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.137e+00	0.8515	15.0	8.67%	3264.2	7.52%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	-1.136e+00	0.8515	2.0	1.16%	290.1	0.67%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e0	-1.132e+00	0.8515	8.0	4.62%	1626.3	3.74%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	-1.107e+00	0.8706	8.0	4.62%	1641.0	3.78%
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer	TATTGAYY	1e0	-1.093e+00	0.8803	14.0	8.09%	3060.4	7.05%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e0	-1.082e+00	0.8880	7.0	4.05%	1422.6	3.28%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e0	-1.079e+00	0.8887	2.0	1.16%	303.2	0.70%
CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer	TATCGATNAN	1e0	-1.077e+00	0.8887	14.0	8.09%	3072.5	7.07%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.066e+00	0.8955	4.0	2.31%	744.9	1.71%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.061e+00	0.8978	6.0	3.47%	1202.0	2.77%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e0	-1.055e+00	0.9003	5.0	2.89%	975.5	2.25%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e0	-1.050e+00	0.9024	20.0	11.56%	4535.5	10.44%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-1.049e+00	0.9024	9.0	5.20%	1908.7	4.39%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	-1.041e+00	0.9061	2.0	1.16%	312.7	0.72%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	-1.037e+00	0.9072	9.0	5.20%	1915.2	4.41%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e0	-1.037e+00	0.9072	8.0	4.62%	1680.4	3.87%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.028e+00	0.9110	1.0	0.58%	111.1	0.26%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer	NNAYTTCCTGHN	1e0	-1.026e+00	0.9110	5.0	2.89%	988.1	2.27%
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer	TYTGACCASWRG	1e0	-1.017e+00	0.9162	4.0	2.31%	763.0	1.76%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.014e+00	0.9170	1.0	0.58%	113.6	0.26%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e0	-1.013e+00	0.9170	32.0	18.50%	7496.8	17.26%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.001e+00	0.9239	2.0	1.16%	322.5	0.74%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-9.997e-01	0.9239	17.0	9.83%	3857.6	8.88%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-9.983e-01	0.9239	9.0	5.20%	1940.4	4.47%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e0	-9.971e-01	0.9239	168.0	97.11%	41810.1	96.26%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-9.950e-01	0.9239	3.0	1.73%	545.8	1.26%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	-9.950e-01	0.9239	3.0	1.73%	545.3	1.26%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-9.932e-01	0.9239	1.0	0.58%	116.2	0.27%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e0	-9.932e-01	0.9239	12.0	6.94%	2659.7	6.12%
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer	TTGAMCTTTG	1e0	-9.758e-01	0.9293	19.0	10.98%	4364.6	10.05%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e0	-9.688e-01	0.9335	6.0	3.47%	1249.1	2.88%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-9.681e-01	0.9335	8.0	4.62%	1722.7	3.97%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e0	-9.634e-01	0.9340	8.0	4.62%	1725.4	3.97%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-9.629e-01	0.9340	20.0	11.56%	4620.9	10.64%
SeqBias: G/A bias	RRRRRRRRRR	1e0	-9.609e-01	0.9340	167.0	96.53%	41568.1	95.70%
SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer	GCAACAGGTG	1e0	-9.607e-01	0.9340	3.0	1.73%	557.6	1.28%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e0	-9.582e-01	0.9340	13.0	7.51%	2927.5	6.74%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-9.563e-01	0.9340	2.0	1.16%	334.1	0.77%
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer	HDGYAATGAAAN	1e0	-9.509e-01	0.9340	17.0	9.83%	3902.5	8.98%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-9.507e-01	0.9340	12.0	6.94%	2692.9	6.20%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e0	-9.490e-01	0.9340	2.0	1.16%	336.0	0.77%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e0	-9.469e-01	0.9340	12.0	6.94%	2695.5	6.21%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e0	-9.468e-01	0.9340	3.0	1.73%	562.2	1.29%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-9.430e-01	0.9340	8.0	4.62%	1738.2	4.00%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-9.413e-01	0.9340	3.0	1.73%	564.0	1.30%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-9.382e-01	0.9340	2.0	1.16%	339.9	0.78%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-9.361e-01	0.9340	4.0	2.31%	797.2	1.84%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e0	-9.346e-01	0.9340	2.0	1.16%	340.0	0.78%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	-9.280e-01	0.9340	5.0	2.89%	1035.6	2.38%
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer	WAABTAGGTCAV	1e0	-9.227e-01	0.9342	1.0	0.58%	127.6	0.29%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-9.225e-01	0.9342	4.0	2.31%	803.4	1.85%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-9.167e-01	0.9355	1.0	0.58%	128.2	0.30%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e0	-9.108e-01	0.9388	6.0	3.47%	1281.3	2.95%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e0	-9.078e-01	0.9394	8.0	4.62%	1761.1	4.05%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e0	-9.029e-01	0.9419	9.0	5.20%	2005.9	4.62%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	-8.964e-01	0.9458	2.0	1.16%	352.0	0.81%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	-8.930e-01	0.9468	2.0	1.16%	352.4	0.81%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-8.790e-01	0.9580	16.0	9.25%	3727.6	8.58%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e0	-8.758e-01	0.9589	5.0	2.89%	1062.2	2.45%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-8.728e-01	0.9596	3.0	1.73%	590.6	1.36%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-8.714e-01	0.9596	12.0	6.94%	2757.0	6.35%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-8.698e-01	0.9596	2.0	1.16%	359.1	0.83%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-8.677e-01	0.9596	6.0	3.47%	1306.2	3.01%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e0	-8.668e-01	0.9596	12.0	6.94%	2761.9	6.36%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-8.665e-01	0.9596	2.0	1.16%	360.0	0.83%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-8.642e-01	0.9596	7.0	4.05%	1549.6	3.57%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	-8.627e-01	0.9596	5.0	2.89%	1069.5	2.46%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e0	-8.596e-01	0.9596	7.0	4.05%	1552.9	3.58%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-8.552e-01	0.9596	8.0	4.62%	1797.6	4.14%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e0	-8.550e-01	0.9596	7.0	4.05%	1555.3	3.58%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e0	-8.532e-01	0.9596	4.0	2.31%	835.7	1.92%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e0	-8.330e-01	0.9719	6.0	3.47%	1327.1	3.06%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-8.330e-01	0.9719	1.0	0.58%	143.7	0.33%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e0	-8.327e-01	0.9719	8.0	4.62%	1813.9	4.18%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-8.327e-01	0.9719	4.0	2.31%	846.0	1.95%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e0	-8.197e-01	0.9762	35.0	20.23%	8491.3	19.55%
SeqBias: TA-repeat	TATATATATA	1e0	-8.106e-01	0.9830	28.0	16.18%	6766.3	15.58%
bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer	VNNGGATTADNN	1e0	-8.100e-01	0.9830	13.0	7.51%	3057.5	7.04%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	-8.066e-01	0.9830	9.0	5.20%	2077.8	4.78%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e0	-8.054e-01	0.9830	9.0	5.20%	2078.3	4.78%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e0	-8.044e-01	0.9830	7.0	4.05%	1589.3	3.66%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e0	-7.986e-01	0.9841	8.0	4.62%	1839.0	4.23%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e0	-7.965e-01	0.9841	6.0	3.47%	1350.7	3.11%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	-7.881e-01	0.9880	1.0	0.58%	152.2	0.35%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e0	-7.881e-01	0.9880	1.0	0.58%	152.4	0.35%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	-7.872e-01	0.9880	4.0	2.31%	868.1	2.00%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e0	-7.866e-01	0.9880	8.0	4.62%	1847.2	4.25%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e0	-7.858e-01	0.9880	7.0	4.05%	1602.6	3.69%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-7.786e-01	0.9889	1.0	0.58%	154.1	0.35%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-7.751e-01	0.9902	10.0	5.78%	2349.4	5.41%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-7.739e-01	0.9902	1.0	0.58%	155.6	0.36%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	-7.728e-01	0.9902	17.0	9.83%	4084.2	9.40%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e0	-7.705e-01	0.9902	19.0	10.98%	4583.6	10.55%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	-7.683e-01	0.9902	4.0	2.31%	878.1	2.02%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e0	-7.665e-01	0.9902	13.0	7.51%	3099.8	7.14%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-7.626e-01	0.9902	12.0	6.94%	2855.5	6.57%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e0	-7.566e-01	0.9938	10.0	5.78%	2365.7	5.45%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-7.566e-01	0.9938	7.0	4.05%	1623.0	3.74%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-7.471e-01	0.9992	2.0	1.16%	400.5	0.92%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	-7.467e-01	0.9992	6.0	3.47%	1383.5	3.19%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-7.464e-01	0.9992	22.0	12.72%	5359.4	12.34%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e0	-7.452e-01	0.9992	9.0	5.20%	2127.5	4.90%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e0	-7.379e-01	1.0000	19.0	10.98%	4622.6	10.64%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e0	-7.375e-01	1.0000	10.0	5.78%	2382.6	5.49%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e0	-7.281e-01	1.0000	4.0	2.31%	900.5	2.07%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e0	-7.190e-01	1.0000	16.0	9.25%	3896.3	8.97%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e0	-7.180e-01	1.0000	29.0	16.76%	7146.3	16.45%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-7.150e-01	1.0000	11.0	6.36%	2652.6	6.11%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-7.073e-01	1.0000	3.0	1.73%	663.0	1.53%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-7.047e-01	1.0000	2.0	1.16%	416.4	0.96%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e0	-7.024e-01	1.0000	7.0	4.05%	1664.3	3.83%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-6.999e-01	1.0000	1.0	0.58%	172.9	0.40%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e0	-6.999e-01	1.0000	5.0	2.89%	1167.0	2.69%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-6.971e-01	1.0000	6.0	3.47%	1418.1	3.26%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e0	-6.933e-01	1.0000	3.0	1.73%	670.1	1.54%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e0	-6.895e-01	1.0000	2.0	1.16%	423.0	0.97%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-6.888e-01	1.0000	17.0	9.83%	4182.4	9.63%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-6.834e-01	1.0000	5.0	2.89%	1177.4	2.71%
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer	YSTGGGTGGTCT	1e0	-6.800e-01	1.0000	1.0	0.58%	177.0	0.41%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e0	-6.800e-01	1.0000	1.0	0.58%	178.0	0.41%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-6.757e-01	1.0000	3.0	1.73%	679.2	1.56%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-6.748e-01	1.0000	7.0	4.05%	1686.5	3.88%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-6.723e-01	1.0000	1.0	0.58%	179.5	0.41%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	-6.688e-01	1.0000	6.0	3.47%	1439.8	3.31%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-6.647e-01	1.0000	1.0	0.58%	181.4	0.42%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e0	-6.623e-01	1.0000	3.0	1.73%	686.1	1.58%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e0	-6.609e-01	1.0000	1.0	0.58%	183.0	0.42%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-6.604e-01	1.0000	3.0	1.73%	687.1	1.58%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e0	-6.592e-01	1.0000	40.0	23.12%	10000.4	23.02%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e0	-6.562e-01	1.0000	14.0	8.09%	3467.6	7.98%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	-6.560e-01	1.0000	8.0	4.62%	1954.7	4.50%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	-6.539e-01	1.0000	4.0	2.31%	944.5	2.17%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-6.523e-01	1.0000	24.0	13.87%	5990.2	13.79%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-6.518e-01	1.0000	10.0	5.78%	2463.9	5.67%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.492e-01	1.0000	3.0	1.73%	693.5	1.60%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-6.444e-01	1.0000	4.0	2.31%	951.0	2.19%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e0	-6.400e-01	1.0000	3.0	1.73%	698.4	1.61%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e0	-6.387e-01	1.0000	7.0	4.05%	1716.6	3.95%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	-6.366e-01	1.0000	4.0	2.31%	956.0	2.20%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e0	-6.333e-01	1.0000	5.0	2.89%	1212.3	2.79%
ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer	GGAACAGCCG	1e0	-6.309e-01	1.0000	3.0	1.73%	703.2	1.62%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-6.309e-01	1.0000	14.0	8.09%	3497.6	8.05%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-6.306e-01	1.0000	8.0	4.62%	1977.3	4.55%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-6.263e-01	1.0000	8.0	4.62%	1981.4	4.56%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e0	-6.259e-01	1.0000	29.0	16.76%	7291.1	16.79%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e0	-6.180e-01	1.0000	1.0	0.58%	194.8	0.45%
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer	NAMCAGCTGK	1e0	-6.153e-01	1.0000	6.0	3.47%	1481.6	3.41%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e0	-6.145e-01	1.0000	7.0	4.05%	1737.2	4.00%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-6.028e-01	1.0000	3.0	1.73%	719.5	1.66%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e0	-6.013e-01	1.0000	13.0	7.51%	3279.4	7.55%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-6.012e-01	1.0000	1.0	0.58%	199.2	0.46%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e0	-5.983e-01	1.0000	14.0	8.09%	3537.2	8.14%
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer	RTGATTKATRGN	1e0	-5.974e-01	1.0000	9.0	5.20%	2265.0	5.21%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-5.925e-01	1.0000	12.0	6.94%	3035.3	6.99%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-5.916e-01	1.0000	15.0	8.67%	3800.2	8.75%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	-5.892e-01	1.0000	3.0	1.73%	727.1	1.67%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e0	-5.890e-01	1.0000	37.0	21.39%	9375.0	21.58%
Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer	TTAATTNAATTA	1e0	-5.826e-01	1.0000	2.0	1.16%	469.5	1.08%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	-5.818e-01	1.0000	1.0	0.58%	205.7	0.47%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	-5.762e-01	1.0000	9.0	5.20%	2286.9	5.27%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-5.744e-01	1.0000	8.0	4.62%	2031.5	4.68%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-5.694e-01	1.0000	1.0	0.58%	209.2	0.48%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-5.664e-01	1.0000	8.0	4.62%	2039.4	4.70%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-5.662e-01	1.0000	3.0	1.73%	741.9	1.71%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-5.645e-01	1.0000	8.0	4.62%	2041.8	4.70%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e0	-5.635e-01	1.0000	13.0	7.51%	3326.1	7.66%
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer	GKBCARAGGTCA	1e0	-5.624e-01	1.0000	6.0	3.47%	1526.1	3.51%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-5.568e-01	1.0000	6.0	3.47%	1531.2	3.53%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	-5.524e-01	1.0000	2.0	1.16%	484.5	1.12%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e0	-5.521e-01	1.0000	9.0	5.20%	2312.6	5.32%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-5.484e-01	1.0000	1.0	0.58%	216.4	0.50%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	-5.479e-01	1.0000	6.0	3.47%	1539.7	3.54%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	-5.448e-01	1.0000	7.0	4.05%	1802.6	4.15%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.447e-01	1.0000	11.0	6.36%	2836.6	6.53%
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer	MCAGCTGBYH	1e0	-5.432e-01	1.0000	8.0	4.62%	2063.8	4.75%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-5.426e-01	1.0000	1.0	0.58%	218.4	0.50%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-5.381e-01	1.0000	6.0	3.47%	1548.4	3.56%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e0	-5.295e-01	1.0000	6.0	3.47%	1556.3	3.58%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	-5.257e-01	1.0000	7.0	4.05%	1821.2	4.19%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-5.256e-01	1.0000	1.0	0.58%	224.4	0.52%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-5.223e-01	1.0000	5.0	2.89%	1300.4	2.99%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-5.222e-01	1.0000	2.0	1.16%	500.8	1.15%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-5.210e-01	1.0000	6.0	3.47%	1564.9	3.60%
EIL4(EIL)/Tomato-EIL4-ChIP-Seq(GSE116581)/Homer	GATTCAWTGAAT	1e0	-5.201e-01	1.0000	1.0	0.58%	226.8	0.52%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e0	-5.201e-01	1.0000	1.0	0.58%	226.9	0.52%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	-5.181e-01	1.0000	4.0	2.31%	1039.0	2.39%
ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer	CTGCCWVCTTTTRTA	1e0	-5.155e-01	1.0000	3.0	1.73%	774.8	1.78%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e0	-5.149e-01	1.0000	9.0	5.20%	2354.7	5.42%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-5.147e-01	1.0000	1.0	0.58%	228.6	0.53%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e0	-5.147e-01	1.0000	1.0	0.58%	228.5	0.53%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-5.120e-01	1.0000	1.0	0.58%	229.7	0.53%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	-5.111e-01	1.0000	3.0	1.73%	777.3	1.79%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-5.108e-01	1.0000	8.0	4.62%	2098.2	4.83%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e0	-5.096e-01	1.0000	3.0	1.73%	778.6	1.79%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-5.086e-01	1.0000	5.0	2.89%	1312.3	3.02%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	-5.018e-01	1.0000	8.0	4.62%	2108.4	4.85%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e0	-4.981e-01	1.0000	4.0	2.31%	1055.4	2.43%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	-4.968e-01	1.0000	3.0	1.73%	787.2	1.81%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e0	-4.965e-01	1.0000	11.0	6.36%	2897.1	6.67%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e0	-4.964e-01	1.0000	5.0	2.89%	1323.5	3.05%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	-4.932e-01	1.0000	7.0	4.05%	1855.9	4.27%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-4.910e-01	1.0000	5.0	2.89%	1328.2	3.06%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	-4.883e-01	1.0000	11.0	6.36%	2908.5	6.70%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e0	-4.825e-01	1.0000	6.0	3.47%	1602.7	3.69%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	-4.787e-01	1.0000	1.0	0.58%	242.6	0.56%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-4.770e-01	1.0000	5.0	2.89%	1341.5	3.09%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e0	-4.763e-01	1.0000	12.0	6.94%	3185.4	7.33%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-4.762e-01	1.0000	1.0	0.58%	244.0	0.56%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	-4.707e-01	1.0000	5.0	2.89%	1347.4	3.10%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	-4.688e-01	1.0000	17.0	9.83%	4495.4	10.35%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-4.671e-01	1.0000	9.0	5.20%	2412.6	5.55%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	-4.666e-01	1.0000	1.0	0.58%	247.4	0.57%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.595e-01	1.0000	1.0	0.58%	250.9	0.58%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-4.573e-01	1.0000	5.0	2.89%	1360.4	3.13%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-4.542e-01	1.0000	15.0	8.67%	4000.2	9.21%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	-4.438e-01	1.0000	6.0	3.47%	1643.9	3.78%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e0	-4.435e-01	1.0000	1.0	0.58%	258.0	0.59%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	-4.402e-01	1.0000	4.0	2.31%	1105.3	2.54%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-4.385e-01	1.0000	2.0	1.16%	550.7	1.27%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	-4.347e-01	1.0000	3.0	1.73%	834.1	1.92%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-4.325e-01	1.0000	1.0	0.58%	262.9	0.61%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-4.298e-01	1.0000	9.0	5.20%	2461.9	5.67%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e0	-4.294e-01	1.0000	7.0	4.05%	1928.6	4.44%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-4.285e-01	1.0000	3.0	1.73%	839.2	1.93%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-4.261e-01	1.0000	3.0	1.73%	841.9	1.94%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e0	-4.179e-01	1.0000	4.0	2.31%	1126.1	2.59%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-4.135e-01	1.0000	1.0	0.58%	271.7	0.63%
SeqBias: CG-repeat	CGCGCGCGCG	1e0	-4.118e-01	1.0000	3.0	1.73%	853.9	1.97%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-4.097e-01	1.0000	4.0	2.31%	1134.1	2.61%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-4.083e-01	1.0000	3.0	1.73%	856.0	1.97%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-4.083e-01	1.0000	3.0	1.73%	856.0	1.97%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e0	-4.068e-01	1.0000	51.0	29.48%	13346.0	30.73%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-4.016e-01	1.0000	4.0	2.31%	1142.0	2.63%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e0	-3.935e-01	1.0000	3.0	1.73%	869.6	2.00%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e0	-3.899e-01	1.0000	2.0	1.16%	585.0	1.35%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e0	-3.878e-01	1.0000	4.0	2.31%	1156.5	2.66%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e0	-3.877e-01	1.0000	9.0	5.20%	2521.5	5.81%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e0	-3.874e-01	1.0000	6.0	3.47%	1709.7	3.94%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-3.840e-01	1.0000	1.0	0.58%	286.9	0.66%
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer	GGTCACCTGAGGTCA	1e0	-3.840e-01	1.0000	1.0	0.58%	286.2	0.66%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e0	-3.816e-01	1.0000	15.0	8.67%	4127.9	9.50%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	-3.814e-01	1.0000	16.0	9.25%	4391.5	10.11%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-3.806e-01	1.0000	21.0	12.14%	5703.6	13.13%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e0	-3.781e-01	1.0000	3.0	1.73%	883.5	2.03%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-3.639e-01	1.0000	2.0	1.16%	604.2	1.39%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-3.634e-01	1.0000	3.0	1.73%	897.0	2.07%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e0	-3.598e-01	1.0000	5.0	2.89%	1467.2	3.38%
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer	BCCWTTGTBYKV	1e0	-3.596e-01	1.0000	12.0	6.94%	3371.5	7.76%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-3.590e-01	1.0000	2.0	1.16%	608.4	1.40%
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer	NHRTCACGACDN	1e0	-3.583e-01	1.0000	15.0	8.67%	4172.9	9.61%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e0	-3.581e-01	1.0000	5.0	2.89%	1469.5	3.38%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e0	-3.555e-01	1.0000	8.0	4.62%	2299.6	5.29%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e0	-3.541e-01	1.0000	5.0	2.89%	1474.6	3.39%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e0	-3.512e-01	1.0000	3.0	1.73%	909.0	2.09%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e0	-3.492e-01	1.0000	3.0	1.73%	911.3	2.10%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-3.491e-01	1.0000	8.0	4.62%	2309.1	5.32%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-3.436e-01	1.0000	1.0	0.58%	309.3	0.71%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e0	-3.414e-01	1.0000	4.0	2.31%	1207.5	2.78%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e0	-3.403e-01	1.0000	1.0	0.58%	311.5	0.72%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	-3.394e-01	1.0000	3.0	1.73%	921.2	2.12%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-3.364e-01	1.0000	8.0	4.62%	2329.7	5.36%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-3.355e-01	1.0000	3.0	1.73%	925.2	2.13%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-3.340e-01	1.0000	2.0	1.16%	629.7	1.45%
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer	VDGGGYGGGGCY	1e0	-3.339e-01	1.0000	1.0	0.58%	315.6	0.73%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e0	-3.308e-01	1.0000	10.0	5.78%	2884.0	6.64%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e0	-3.306e-01	1.0000	2.0	1.16%	632.2	1.46%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e0	-3.292e-01	1.0000	1.0	0.58%	318.4	0.73%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e0	-3.288e-01	1.0000	4.0	2.31%	1222.6	2.81%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-3.249e-01	1.0000	18.0	10.40%	5039.0	11.60%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-3.245e-01	1.0000	1.0	0.58%	321.4	0.74%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e0	-3.245e-01	1.0000	12.0	6.94%	3438.0	7.92%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-3.224e-01	1.0000	3.0	1.73%	939.2	2.16%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e0	-3.205e-01	1.0000	3.0	1.73%	941.1	2.17%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e0	-3.195e-01	1.0000	2.0	1.16%	642.0	1.48%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	-3.169e-01	1.0000	6.0	3.47%	1805.1	4.16%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	-3.154e-01	1.0000	1.0	0.58%	327.7	0.75%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e0	-3.152e-01	1.0000	2.0	1.16%	646.2	1.49%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-3.140e-01	1.0000	1.0	0.58%	328.2	0.76%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e0	-3.124e-01	1.0000	3.0	1.73%	950.7	2.19%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-3.117e-01	1.0000	5.0	2.89%	1530.5	3.52%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-3.110e-01	1.0000	5.0	2.89%	1531.4	3.53%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e0	-3.094e-01	1.0000	11.0	6.36%	3196.7	7.36%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-3.063e-01	1.0000	6.0	3.47%	1821.8	4.19%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	-3.059e-01	1.0000	10.0	5.78%	2930.7	6.75%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e0	-3.047e-01	1.0000	9.0	5.20%	2658.7	6.12%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-2.996e-01	1.0000	4.0	2.31%	1259.5	2.90%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	-2.984e-01	1.0000	3.0	1.73%	967.0	2.23%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-2.950e-01	1.0000	3.0	1.73%	970.8	2.24%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-2.913e-01	1.0000	1.0	0.58%	345.0	0.79%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e0	-2.906e-01	1.0000	4.0	2.31%	1271.9	2.93%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e0	-2.875e-01	1.0000	3.0	1.73%	979.3	2.25%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e0	-2.862e-01	1.0000	6.0	3.47%	1853.6	4.27%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	-2.835e-01	1.0000	2.0	1.16%	677.3	1.56%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-2.798e-01	1.0000	5.0	2.89%	1577.4	3.63%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-2.797e-01	1.0000	2.0	1.16%	681.9	1.57%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-2.786e-01	1.0000	3.0	1.73%	990.6	2.28%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	-2.755e-01	1.0000	1.0	0.58%	356.8	0.82%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-2.747e-01	1.0000	5.0	2.89%	1585.4	3.65%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-2.747e-01	1.0000	7.0	4.05%	2156.5	4.96%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e0	-2.727e-01	1.0000	14.0	8.09%	4091.4	9.42%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	-2.725e-01	1.0000	6.0	3.47%	1876.6	4.32%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e0	-2.712e-01	1.0000	10.0	5.78%	3000.4	6.91%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-2.703e-01	1.0000	10.0	5.78%	3002.9	6.91%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-2.693e-01	1.0000	4.0	2.31%	1301.7	3.00%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e0	-2.692e-01	1.0000	1.0	0.58%	361.3	0.83%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-2.678e-01	1.0000	5.0	2.89%	1596.4	3.68%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	-2.586e-01	1.0000	5.0	2.89%	1611.0	3.71%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e0	-2.571e-01	1.0000	6.0	3.47%	1903.6	4.38%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e0	-2.521e-01	1.0000	4.0	2.31%	1327.9	3.06%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	-2.468e-01	1.0000	1.0	0.58%	380.6	0.88%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e0	-2.414e-01	1.0000	3.0	1.73%	1040.1	2.39%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.378e-01	1.0000	5.0	2.89%	1647.0	3.79%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e0	-2.376e-01	1.0000	2.0	1.16%	729.0	1.68%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e0	-2.347e-01	1.0000	1.0	0.58%	391.2	0.90%
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer	NRBCARRGGTCA	1e0	-2.347e-01	1.0000	4.0	2.31%	1355.5	3.12%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-2.337e-01	1.0000	1.0	0.58%	392.7	0.90%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.305e-01	1.0000	4.0	2.31%	1362.3	3.14%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-2.298e-01	1.0000	8.0	4.62%	2530.2	5.83%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-2.292e-01	1.0000	17.0	9.83%	5023.6	11.57%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.267e-01	1.0000	6.0	3.47%	1961.4	4.52%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-2.265e-01	1.0000	2.0	1.16%	743.9	1.71%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-2.255e-01	1.0000	12.0	6.94%	3663.4	8.43%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-2.238e-01	1.0000	5.0	2.89%	1673.8	3.85%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-2.204e-01	1.0000	1.0	0.58%	405.9	0.93%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-2.190e-01	1.0000	2.0	1.16%	753.6	1.73%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	-2.180e-01	1.0000	6.0	3.47%	1979.6	4.56%
SeqBias: CG bias	SSSSSSSSSS	1e0	-2.177e-01	1.0000	66.0	38.15%	17840.0	41.07%
PSE(SNAPc)/K562-mStart-Seq/Homer	WAVTCACCMTAASYDAAAAG	1e0	-2.170e-01	1.0000	3.0	1.73%	1077.6	2.48%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-2.170e-01	1.0000	3.0	1.73%	1077.4	2.48%
SeqBias: CA-repeat	CACACACACA	1e0	-2.165e-01	1.0000	42.0	24.28%	11685.4	26.90%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e0	-2.162e-01	1.0000	9.0	5.20%	2846.4	6.55%
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer	TGATKGATGR	1e0	-2.153e-01	1.0000	2.0	1.16%	758.4	1.75%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e0	-2.120e-01	1.0000	3.0	1.73%	1085.9	2.50%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-2.117e-01	1.0000	2.0	1.16%	763.6	1.76%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.117e-01	1.0000	2.0	1.16%	763.5	1.76%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-2.088e-01	1.0000	1.0	0.58%	417.1	0.96%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-2.047e-01	1.0000	4.0	2.31%	1409.0	3.24%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e0	-2.033e-01	1.0000	31.0	17.92%	8860.0	20.40%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.975e-01	1.0000	4.0	2.31%	1422.2	3.27%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.958e-01	1.0000	2.0	1.16%	786.4	1.81%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.945e-01	1.0000	2.0	1.16%	788.8	1.82%
HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer	TWVGGTCCGC	1e0	-1.944e-01	1.0000	1.0	0.58%	433.6	1.00%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.944e-01	1.0000	1.0	0.58%	433.5	1.00%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.902e-01	1.0000	1.0	0.58%	438.6	1.01%
ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer	GNMCAGGTGTGC	1e0	-1.899e-01	1.0000	2.0	1.16%	795.3	1.83%
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer	NDATGASTCAYN	1e0	-1.894e-01	1.0000	3.0	1.73%	1124.8	2.59%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.886e-01	1.0000	2.0	1.16%	797.6	1.84%
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer	TGTTTAYTTAGC	1e0	-1.860e-01	1.0000	4.0	2.31%	1445.2	3.33%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-1.860e-01	1.0000	6.0	3.47%	2051.1	4.72%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.836e-01	1.0000	2.0	1.16%	805.9	1.86%
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer	MCTCCCMCRCAB	1e0	-1.819e-01	1.0000	1.0	0.58%	448.7	1.03%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.792e-01	1.0000	3.0	1.73%	1143.6	2.63%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e0	-1.770e-01	1.0000	9.0	5.20%	2952.8	6.80%
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer	YGGCCCCGCCCC	1e0	-1.757e-01	1.0000	2.0	1.16%	819.0	1.89%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.756e-01	1.0000	1.0	0.58%	456.5	1.05%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	-1.756e-01	1.0000	3.0	1.73%	1150.3	2.65%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e0	-1.754e-01	1.0000	7.0	4.05%	2374.2	5.47%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.718e-01	1.0000	1.0	0.58%	461.1	1.06%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	-1.709e-01	1.0000	17.0	9.83%	5222.8	12.02%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	-1.696e-01	1.0000	7.0	4.05%	2391.0	5.50%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.686e-01	1.0000	6.0	3.47%	2095.2	4.82%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e0	-1.609e-01	1.0000	3.0	1.73%	1180.5	2.72%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.595e-01	1.0000	1.0	0.58%	478.7	1.10%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-1.574e-01	1.0000	7.0	4.05%	2425.7	5.58%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e0	-1.574e-01	1.0000	4.0	2.31%	1509.7	3.48%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-1.514e-01	1.0000	1.0	0.58%	490.3	1.13%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	-1.512e-01	1.0000	7.0	4.05%	2444.5	5.63%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	-1.505e-01	1.0000	5.0	2.89%	1839.4	4.23%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.491e-01	1.0000	5.0	2.89%	1843.7	4.24%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e0	-1.483e-01	1.0000	12.0	6.94%	3909.5	9.00%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e0	-1.479e-01	1.0000	6.0	3.47%	2153.1	4.96%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.475e-01	1.0000	1.0	0.58%	496.5	1.14%
Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer	ACTTCCKGKT	1e0	-1.473e-01	1.0000	4.0	2.31%	1534.2	3.53%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.470e-01	1.0000	12.0	6.94%	3914.4	9.01%
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer	CCTTTGATST	1e0	-1.469e-01	1.0000	3.0	1.73%	1211.9	2.79%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.437e-01	1.0000	1.0	0.58%	502.9	1.16%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e0	-1.423e-01	1.0000	2.0	1.16%	880.3	2.03%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e0	-1.414e-01	1.0000	2.0	1.16%	883.0	2.03%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	-1.409e-01	1.0000	2.0	1.16%	883.8	2.03%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e0	-1.383e-01	1.0000	4.0	2.31%	1558.2	3.59%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e0	-1.378e-01	1.0000	8.0	4.62%	2786.4	6.42%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	-1.365e-01	1.0000	12.0	6.94%	3956.1	9.11%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e0	-1.339e-01	1.0000	14.0	8.09%	4537.8	10.45%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e0	-1.332e-01	1.0000	4.0	2.31%	1572.9	3.62%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e0	-1.325e-01	1.0000	2.0	1.16%	901.6	2.08%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.312e-01	1.0000	1.0	0.58%	524.0	1.21%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.307e-01	1.0000	1.0	0.58%	524.6	1.21%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e0	-1.298e-01	1.0000	6.0	3.47%	2210.0	5.09%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.294e-01	1.0000	7.0	4.05%	2516.7	5.79%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.279e-01	1.0000	1.0	0.58%	529.7	1.22%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e0	-1.273e-01	1.0000	1.0	0.58%	530.9	1.22%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e0	-1.268e-01	1.0000	3.0	1.73%	1261.1	2.90%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	-1.265e-01	1.0000	22.0	12.72%	6802.3	15.66%
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer	NABTCCCWDGGGAVH	1e0	-1.189e-01	1.0000	1.0	0.58%	546.3	1.26%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.107e-01	1.0000	5.0	2.89%	1964.7	4.52%
Tal1	CATCTG	1e0	-1.107e-01	1.0000	5.0	2.89%	1964.9	4.52%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e0	-1.063e-01	1.0000	2.0	1.16%	966.7	2.23%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.028e-01	1.0000	1.0	0.58%	580.7	1.34%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e0	-1.021e-01	1.0000	11.0	6.36%	3824.4	8.80%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-9.979e-02	1.0000	6.0	3.47%	2323.4	5.35%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	-9.631e-02	1.0000	7.0	4.05%	2650.2	6.10%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e0	-9.476e-02	1.0000	3.0	1.73%	1359.9	3.13%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-9.057e-02	1.0000	6.0	3.47%	2364.3	5.44%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e0	-8.767e-02	1.0000	10.0	5.78%	3606.1	8.30%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-8.743e-02	1.0000	7.0	4.05%	2693.9	6.20%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-8.330e-02	1.0000	5.0	2.89%	2077.7	4.78%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e0	-8.115e-02	1.0000	6.0	3.47%	2410.7	5.55%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-7.985e-02	1.0000	3.0	1.73%	1416.4	3.26%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	-7.274e-02	1.0000	1.0	0.58%	662.6	1.53%
REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer	TVCTCTGTTT	1e0	-7.171e-02	1.0000	2.0	1.16%	1081.7	2.49%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-6.696e-02	1.0000	4.0	2.31%	1825.9	4.20%
Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer	TRCACCTGCY	1e0	-6.634e-02	1.0000	1.0	0.58%	684.8	1.58%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e0	-6.256e-02	1.0000	1.0	0.58%	698.5	1.61%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-6.178e-02	1.0000	1.0	0.58%	701.8	1.62%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-6.059e-02	1.0000	11.0	6.36%	4091.0	9.42%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-5.951e-02	1.0000	1.0	0.58%	710.8	1.64%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-5.947e-02	1.0000	3.0	1.73%	1513.5	3.48%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-5.645e-02	1.0000	3.0	1.73%	1530.6	3.52%
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer	GGYAATGAAA	1e0	-5.635e-02	1.0000	2.0	1.16%	1151.7	2.65%
Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer	NANTGCSGCA	1e0	-5.544e-02	1.0000	1.0	0.58%	727.5	1.67%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-5.523e-02	1.0000	5.0	2.89%	2236.1	5.15%
PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer	TGGTACATTCCA	1e0	-5.498e-02	1.0000	1.0	0.58%	729.1	1.68%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-5.482e-02	1.0000	2.0	1.16%	1159.1	2.67%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e0	-4.793e-02	1.0000	1.0	0.58%	762.2	1.75%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e0	-4.656e-02	1.0000	11.0	6.36%	4220.0	9.72%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e0	-4.627e-02	1.0000	2.0	1.16%	1208.4	2.78%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-4.617e-02	1.0000	1.0	0.58%	771.5	1.78%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-4.564e-02	1.0000	3.0	1.73%	1599.6	3.68%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-4.424e-02	1.0000	3.0	1.73%	1609.3	3.71%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-4.169e-02	1.0000	2.0	1.16%	1238.2	2.85%
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer	VVATGACGTCAT	1e0	-4.128e-02	1.0000	1.0	0.58%	798.9	1.84%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e0	-4.000e-02	1.0000	7.0	4.05%	3027.8	6.97%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e0	-3.916e-02	1.0000	2.0	1.16%	1256.6	2.89%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-3.835e-02	1.0000	2.0	1.16%	1263.0	2.91%
ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer	ACCGGAAGTG	1e0	-3.549e-02	1.0000	4.0	2.31%	2049.8	4.72%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e0	-3.458e-02	1.0000	8.0	4.62%	3413.3	7.86%
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer	GTGACCTTGRVN	1e0	-3.103e-02	1.0000	1.0	0.58%	868.0	2.00%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e0	-2.953e-02	1.0000	1.0	0.58%	879.4	2.02%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-2.562e-02	1.0000	3.0	1.73%	1783.9	4.11%
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer	VNAGGKCAAAGGTCA	1e0	-2.232e-02	1.0000	1.0	0.58%	947.8	2.18%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e0	-2.181e-02	1.0000	6.0	3.47%	2931.0	6.75%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	-2.158e-02	1.0000	6.0	3.47%	2934.3	6.76%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e0	-2.118e-02	1.0000	4.0	2.31%	2225.3	5.12%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	-2.115e-02	1.0000	1.0	0.58%	960.2	2.21%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e0	-2.030e-02	1.0000	1.0	0.58%	970.7	2.23%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e0	-1.814e-02	1.0000	8.0	4.62%	3680.6	8.47%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	-1.802e-02	1.0000	1.0	0.58%	999.7	2.30%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e0	-1.773e-02	1.0000	10.0	5.78%	4345.8	10.01%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e0	-1.673e-02	1.0000	1.0	0.58%	1017.0	2.34%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e0	-1.475e-02	1.0000	9.0	5.20%	4096.2	9.43%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e0	-1.456e-02	1.0000	8.0	4.62%	3768.3	8.68%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.413e-02	1.0000	1.0	0.58%	1058.0	2.44%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e0	-1.347e-02	1.0000	7.0	4.05%	3458.3	7.96%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.329e-02	1.0000	1.0	0.58%	1073.2	2.47%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	-9.222e-03	1.0000	4.0	2.31%	2499.5	5.75%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-8.407e-03	1.0000	5.0	2.89%	2911.4	6.70%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e0	-8.232e-03	1.0000	2.0	1.16%	1695.0	3.90%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e0	-7.854e-03	1.0000	2.0	1.16%	1708.6	3.93%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-7.443e-03	1.0000	1.0	0.58%	1214.0	2.80%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-6.621e-03	1.0000	2.0	1.16%	1755.0	4.04%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-6.288e-03	1.0000	1.0	0.58%	1255.7	2.89%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	-6.211e-03	1.0000	1.0	0.58%	1258.1	2.90%
 Ik-1	NHTTGGGAATRCC	1e0	-3.983e-03	1.0000	173.0	100.00%	43435.1	100.00%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-3.729e-03	1.0000	3.0	1.73%	2367.9	5.45%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e0	-1.315e-03	1.0000	12.0	6.94%	6054.3	13.94%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e0	-1.167e-03	1.0000	2.0	1.16%	2223.2	5.12%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-8.690e-04	1.0000	2.0	1.16%	2301.2	5.30%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e0	-7.030e-04	1.0000	12.0	6.94%	6288.0	14.48%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e0	-3.300e-04	1.0000	1.0	0.58%	1967.7	4.53%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	43.0	0.10%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	596.8	1.37%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	67.1	0.15%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	0.000e+00	1.0000	0.0	0.00%	156.5	0.36%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	0.000e+00	1.0000	0.0	0.00%	36.1	0.08%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	0.000e+00	1.0000	0.0	0.00%	449.8	1.04%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	0.000e+00	1.0000	0.0	0.00%	188.5	0.43%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	30.6	0.07%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	10.1	0.02%
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	124.7	0.29%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	12.9	0.03%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	96.9	0.22%
Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer	TAAYCYAATCAA	1e0	0.000e+00	1.0000	0.0	0.00%	225.3	0.52%
DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer	BCWGATTCAATCAAN	1e0	0.000e+00	1.0000	0.0	0.00%	5.6	0.01%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	0.000e+00	1.0000	0.0	0.00%	91.9	0.21%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	0.000e+00	1.0000	0.0	0.00%	313.9	0.72%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	4.4	0.01%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	0.000e+00	1.0000	0.0	0.00%	86.7	0.20%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	0.000e+00	1.0000	0.0	0.00%	88.2	0.20%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	0.000e+00	1.0000	0.0	0.00%	188.8	0.43%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	0.000e+00	1.0000	0.0	0.00%	75.4	0.17%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	613.2	1.41%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	0.000e+00	1.0000	0.0	0.00%	353.8	0.81%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	213.1	0.49%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	0.000e+00	1.0000	0.0	0.00%	370.2	0.85%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	0.000e+00	1.0000	0.0	0.00%	191.5	0.44%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	0.000e+00	1.0000	0.0	0.00%	113.9	0.26%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	19.4	0.04%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	69.3	0.16%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	26.1	0.06%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	0.000e+00	1.0000	0.0	0.00%	112.9	0.26%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	0.000e+00	1.0000	0.0	0.00%	548.9	1.26%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	269.7	0.62%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	208.1	0.48%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	0.000e+00	1.0000	0.0	0.00%	279.7	0.64%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	0.000e+00	1.0000	0.0	0.00%	130.6	0.30%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	218.0	0.50%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	180.7	0.42%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	0.000e+00	1.0000	0.0	0.00%	171.6	0.40%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	426.2	0.98%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	0.000e+00	1.0000	0.0	0.00%	467.7	1.08%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	88.0	0.20%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	167.4	0.39%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	0.000e+00	1.0000	0.0	0.00%	130.4	0.30%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	0.000e+00	1.0000	0.0	0.00%	151.0	0.35%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	0.000e+00	1.0000	0.0	0.00%	451.1	1.04%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	0.000e+00	1.0000	0.0	0.00%	107.7	0.25%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	37.4	0.09%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	0.000e+00	1.0000	0.0	0.00%	413.8	0.95%
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer	TTCAAAWTAAAAGTC	1e0	0.000e+00	1.0000	0.0	0.00%	347.9	0.80%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	66.0	0.15%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	0.000e+00	1.0000	0.0	0.00%	150.9	0.35%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	0.000e+00	1.0000	0.0	0.00%	169.7	0.39%
NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer	AWWWTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	63.3	0.15%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	51.3	0.12%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	10.3	0.02%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	37.5	0.09%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	0.000e+00	1.0000	0.0	0.00%	263.2	0.61%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	243.1	0.56%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	22.9	0.05%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	8.8	0.02%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	46.7	0.11%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	11.3	0.03%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	45.8	0.11%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	0.000e+00	1.0000	0.0	0.00%	114.3	0.26%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	39.1	0.09%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	0.000e+00	1.0000	0.0	0.00%	157.2	0.36%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	0.000e+00	1.0000	0.0	0.00%	33.9	0.08%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	0.000e+00	1.0000	0.0	0.00%	196.2	0.45%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	0.000e+00	1.0000	0.0	0.00%	272.7	0.63%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	217.8	0.50%
PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer	YCCDNTCCAGGTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	1278.9	2.94%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	0.000e+00	1.0000	0.0	0.00%	232.2	0.53%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	30.4	0.07%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	3.6	0.01%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	56.6	0.13%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	0.000e+00	1.0000	0.0	0.00%	224.7	0.52%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	0.000e+00	1.0000	0.0	0.00%	73.0	0.17%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	0.000e+00	1.0000	0.0	0.00%	55.1	0.13%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	0.000e+00	1.0000	0.0	0.00%	362.2	0.83%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	9.5	0.02%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	0.000e+00	1.0000	0.0	0.00%	481.4	1.11%
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer	TGWAAYCTGABACCB	1e0	0.000e+00	1.0000	0.0	0.00%	76.4	0.18%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	33.1	0.08%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	340.3	0.78%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	534.3	1.23%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	0.000e+00	1.0000	0.0	0.00%	345.1	0.79%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	15.3	0.04%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	0.000e+00	1.0000	0.0	0.00%	258.6	0.60%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	0.000e+00	1.0000	0.0	0.00%	124.8	0.29%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	131.2	0.30%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	59.2	0.14%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	0.000e+00	1.0000	0.0	0.00%	249.4	0.57%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	0.000e+00	1.0000	0.0	0.00%	156.5	0.36%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	0.000e+00	1.0000	0.0	0.00%	512.3	1.18%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	60.5	0.14%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	8.7	0.02%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	0.000e+00	1.0000	0.0	0.00%	54.7	0.13%
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer	GCACAYAGTAGGKCY	1e0	0.000e+00	1.0000	0.0	0.00%	11.1	0.03%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	87.8	0.20%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	25.8	0.06%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	0.5	0.00%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	0.000e+00	1.0000	0.0	0.00%	86.0	0.20%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	0.000e+00	1.0000	0.0	0.00%	103.9	0.24%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	17.7	0.04%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	26.1	0.06%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	0.000e+00	1.0000	0.0	0.00%	114.2	0.26%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	4.6	0.01%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	111.7	0.26%
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer	RHHCAGAGAGGB	1e0	0.000e+00	1.0000	0.0	0.00%	16.4	0.04%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	30.7	0.07%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	0.000e+00	1.0000	0.0	0.00%	75.3	0.17%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	0.000e+00	1.0000	0.0	0.00%	105.8	0.24%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	0.000e+00	1.0000	0.0	0.00%	287.2	0.66%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	0.000e+00	1.0000	0.0	0.00%	310.4	0.71%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e0	0.000e+00	1.0000	0.0	0.00%	66.0	0.15%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	212.0	0.49%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e0	0.000e+00	1.0000	0.0	0.00%	112.0	0.26%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	78.5	0.18%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e0	0.000e+00	1.0000	0.0	0.00%	178.8	0.41%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	177.2	0.41%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	0.000e+00	1.0000	0.0	0.00%	396.1	0.91%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	0.000e+00	1.0000	0.0	0.00%	371.7	0.86%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	30.8	0.07%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	0.000e+00	1.0000	0.0	0.00%	37.0	0.09%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	56.8	0.13%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e0	0.000e+00	1.0000	0.0	0.00%	727.4	1.67%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	0.000e+00	1.0000	0.0	0.00%	250.4	0.58%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e0	0.000e+00	1.0000	0.0	0.00%	404.4	0.93%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	698.3	1.61%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	0.000e+00	1.0000	0.0	0.00%	4.3	0.01%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e0	0.000e+00	1.0000	0.0	0.00%	69.2	0.16%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e0	0.000e+00	1.0000	0.0	0.00%	525.1	1.21%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	0.000e+00	1.0000	0.0	0.00%	9.2	0.02%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	0.000e+00	1.0000	0.0	0.00%	36.5	0.08%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	0.000e+00	1.0000	0.0	0.00%	117.9	0.27%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	383.4	0.88%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	329.2	0.76%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	116.8	0.27%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e0	0.000e+00	1.0000	0.0	0.00%	49.6	0.11%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e0	0.000e+00	1.0000	0.0	0.00%	66.6	0.15%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	48.3	0.11%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	259.1	0.60%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	0.000e+00	1.0000	0.0	0.00%	1050.4	2.42%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	0.000e+00	1.0000	0.0	0.00%	307.8	0.71%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	143.8	0.33%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	132.7	0.31%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	0.000e+00	1.0000	0.0	0.00%	2.5	0.01%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	0.000e+00	1.0000	0.0	0.00%	553.9	1.28%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e0	0.000e+00	1.0000	0.0	0.00%	118.4	0.27%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	265.8	0.61%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e0	0.000e+00	1.0000	0.0	0.00%	509.2	1.17%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	0.000e+00	1.0000	0.0	0.00%	14.2	0.03%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	0.000e+00	1.0000	0.0	0.00%	1.0	0.00%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	324.2	0.75%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e0	0.000e+00	1.0000	0.0	0.00%	42.8	0.10%