Information for 6-CCCTTTTTTGGG (Motif 9)

T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C G T C A C G T A C G T A C G T A C G T A T C G A C A T G C T A G A C T G
p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.805
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif41.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets63.3 +/- 30.3bp
Average Position of motif in Background48.3 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CCCTTTTTTGGG
-CCCTTTTTGG-
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T G A T C G A T C G A T C G C A T G C A T C G A T C G A T C A G T C A T G C A T G A C G T

SEP3/MA0563.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CCCTTTTTTGGG
TCCATTTTTGG-
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A G C T G T A C A G T C C G T A G A C T C G A T A C G T C A G T C A G T C T A G A C T G A C G T

TIA1(RRM)/Homo_sapiens-RNCMPT00077-PBM/HughesRNA

Match Rank:3
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CCCTTTTTTGGG
---TTTTTTG--
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T

RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CCCTTTTTTGGG
-CCWWTTTTRG-
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T G A T C A G T C G C A T G C A T C G A T C G A T G C A T C G A T C T A G A C T G A C G T

RALY(RRM)/Homo_sapiens-RNCMPT00159-PBM/HughesRNA

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CCCTTTTTTGGG
---TTTTTTG--
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T

ORB2(RRM)/Drosophila_melanogaster-RNCMPT00126-PBM/HughesRNA

Match Rank:6
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CCCTTTTTTGGG
----GTTTGGG-
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A C T G A C G T

TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer

Match Rank:7
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCCTTTTTTGGG
-CYATTTTTGG-
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T T G A C A G T C G C T A G C A T G C A T G C A T G C A T C G A T T C A G C A T G A C G T

PFI1435w(RRM)/Plasmodium_falciparum-RNCMPT00202-PBM/HughesRNA

Match Rank:8
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CCCTTTTTTGGG
---TTTTTTG--
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T

hb/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CCCTTTTTTGGG
---TTTTTTTG-
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T C G A T G A C T C G A T G A C T C G A T G C A T G C A T A C T G A C G T

TIAR-3(RRM)/Caenorhabditis_elegans-RNCMPT00005-PBM/HughesRNA

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CCCTTTTTTGGG
--CTTTTTT---
 T G A C A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G
A C G T A C G T G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T