Information for 5-ACTCGTCAAA (Motif 7)

G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A T C G C G T A A G T C C T A G C T G A A C T G A C G T
p-value:1e-8
log p-value:-1.854e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif63.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets56.9 +/- 31.1bp
Average Position of motif in Background47.4 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ACTCGTCAAA-
GCTCGTAAAAA
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

exd/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:ACTCGTCAAA-
-NTTGTCAAAN
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T
A C G T A C G T G C A T A G C T C T A G A C G T A G T C C G T A C G T A G T C A C G T A

exd/MA0222.1/Jaspar

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:ACTCGTCAAA-
---TGTCAAAN
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A G C T C T A G A C G T A G T C C G T A C G T A G T C A C G T A

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ACTCGTCAAA---
AAACCTCGTAAAATTT
 A C G T A C G T A C G T G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACTCGTCAAA---
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXD12/MA0873.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACTCGTCAAA-
AGTCGTAAAAA
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACTCGTCAAA-
GGTCGTAAAAA
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACTCGTCAAA--
GGTCGTAAAATT
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

ARF18/MA1689.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACTCGTCAAA---
ACCCGACAAAAAT
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T A C G T A C G T
C G T A T A G C G A T C T G A C C T A G T C G A A T G C T G C A T C G A T C G A T C G A C G T A C G A T

ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACTCGTCAAA-
-ATCGTAAAAT
 G T C A A G T C A G C T A G T C C T A G G A C T A T G C C G T A C G T A C G T A A C G T
A C G T G T C A G C A T A G T C A C T G A G C T C G T A C G T A C G T A G C T A G A C T