Information for 4-GGGCAATTTCGT (Motif 5)

A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C C T A G C G T A C G T A C T G A A G C T A C G T A C T G A G T C A G T C G T A C
p-value:1e-9
log p-value:-2.093e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.5 +/- 17.0bp
Average Position of motif in Background50.6 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown1/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGCAATTTCGT--
RGGGTAWWWTHGTAA
 A C G T A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C T G A A C T G C T A G C T A G G A C T C G T A C G A T C G A T C G A T G C A T G A T C A C T G C A G T G T C A G C T A

CG17838(RRM)/Drosophila_melanogaster-RNCMPT00131-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGGCAATTTCGT
---AAATTTC--
 A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
A C G T A C G T A C G T G T C A C G T A C G T A A C G T A C G T A C G T T A G C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGCAATTTCGT
-GGGAATTTCC-
 A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

HAP1/HAP1_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCAATTTCGT
-GGAAATATCGG
 A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
A C G T A T C G T A C G T G C A T C G A G C T A A G C T G C T A G A C T G T A C T C A G A T C G

AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGCAATTTCGT
TTTAAGGGCAYTTTT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
G C A T G C A T C G A T C G T A C T G A C T A G A C T G C T A G G A T C G C T A G A C T G C A T G C A T G C A T G A C T A C G T A C G T

BEAF-32B/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGGCAATTTCGT
----AATATCGC
 A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A A C G T A G T C A C T G A G C T

RELB/MA1117.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAATTTCGT
NNGGGGAATNC---
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T A C G T A C G T

HAP1(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGCAATTTCGT
-GGNGTTATCG-
 A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
A C G T A T C G T A C G T C G A T C A G G C A T A G C T C G T A G A C T G A T C T A C G A C G T

HNRNPR(RRM)/Gallus_gallus-RNCMPT00288-PBM/HughesRNA

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGCAATTTCGT
----AATTTGG-
 A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T
A C G T A C G T A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C T G A C T G A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAATTTCGT-
CCTTGCAATTTTTNN
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A C T G A A G C T A C G T A C G T A G T C A C T G A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C