Information for 4-TCTGCCCA (Motif 4)

G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A
Reverse Opposite:
G C A T T C A G T A C G C A T G G A T C G T C A A C T G C T G A
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.592
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif24.28%
Number of Background Sequences with motif3311.3
Percentage of Background Sequences with motif7.62%
Average Position of motif in Targets41.7 +/- 27.2bp
Average Position of motif in Background49.3 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TCTGCCCA----
TYTGACCASWRG
 G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TCTGCCCA----
--TGCCCAGNHW
 G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TCTGCCCA-----
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCTGCCCA--
-ATGCCCACC
 G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PCF/Arabidopsis-Promoters/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCCCA-----
NHHARGCCCAWWWNN
 A C G T A C G T G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C A T G C T A C T A G A C T G A G T C A G T C A G T C C G T A G C A T G C A T C G T A C G T A C G T A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTGCCCA--
-CTGCCCGCA
 G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCCCA-
ATCACCCCAT
 A C G T G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTGCCCA--
GGTGCCAAGT
 G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCCCA--
GCTCCGCCCMCY
 A C G T A C G T G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

CNOT4(RRM)/Homo_sapiens-RNCMPT00156-PBM/HughesRNA

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCCCA
NTCTGTC--
 A C G T G A C T T G A C C A G T C T A G G T A C A T G C A G T C C G T A
G C T A A C G T A T G C A C G T A T C G A C G T A T G C A C G T A C G T