Information for 4-GGGCCCTACT (Motif 3)

T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
Reverse Opposite:
C G T A A T C G G C A T G C T A C A T G A C T G C T A G T A G C A G T C A G T C
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.678
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif19.08%
Number of Background Sequences with motif1982.8
Percentage of Background Sequences with motif4.56%
Average Position of motif in Targets46.6 +/- 28.8bp
Average Position of motif in Background49.5 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCP7/MA1291.1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCCTACT
GTGGGNCCCAC-
 A C G T A C G T T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
T C A G G A C T A C T G A C T G C T A G G A C T A G T C A G T C A G T C C T G A A G T C A C G T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00100-PBM/HughesRNA

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GGGCCCTACT
---CCCTACT
 T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
A C G T A C G T A C G T G A T C G T A C A G T C A C G T C G T A A G T C A C G T

TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCTACT---
GTGGGSCCCACHHNN
 A C G T A C G T T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T A C G T A C G T A C G T
C T A G A G C T C A T G C A T G C T A G A T G C G A T C G T A C G T A C C T G A A G T C G C T A G C T A G C A T A T C G

StBRC1/MA1410.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGGCCCTACT
GGGGCCCCCC-
 A C G T T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
A C T G C A T G A C T G A T C G T A G C T A G C T G A C T G A C G A T C A G T C A C G T

TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCTACT
GGGGGCCCMMCN
 A C G T A C G T T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
C A T G A C T G C A T G A C T G T A C G A T G C A G T C G T A C G T A C T G A C G A T C G A C T

OJ1581_H09.2/MA1031.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCTACT
GTGGGCCCAC--
 A C G T A C G T T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
C A T G A C G T A C T G A C T G C T A G G A T C A G T C G T A C T G C A G T A C A C G T A C G T

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00096-PBM/HughesRNA

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGGCCCTACT
---CCCTACC
 T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
A C G T A C G T A C G T A G T C A G T C A G T C C G A T C G T A G T A C A G T C

HRB87F(RRM)/Drosophila_melanogaster-RNCMPT00029-PBM/HughesRNA

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGGCCCTACT
---CCCTACC
 T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
A C G T A C G T A C G T A G T C A G T C A G T C C G A T C G T A G T A C A G T C

At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GGGCCCTACT-
WDGTGGGCCCCACDN
 A C G T A C G T A C G T A C G T T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T A C G T
C G A T C A T G T C A G A G C T C T A G A C T G C T A G G T A C G T A C G T A C G T A C T C G A A T G C C G T A C G A T

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00095-PBM/HughesRNA

Match Rank:10
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGGCCCTACT
---CCCTACC
 T C A G C T A G A T C G A G T C G T A C G T A C C G A T C G T A T A G C G C A T
A C G T A C G T A C G T A G T C A G T C A G T C C G A T C G T A G T A C A G T C