Information for 9-GGGGCTTH (Motif 13)

C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A
Reverse Opposite:
C G A T C T G A C G T A T C A G T A G C A T G C T A G C G T A C
p-value:1e-4
log p-value:-9.829e+00
Information Content per bp:1.645
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif15.03%
Number of Background Sequences with motif2808.4
Percentage of Background Sequences with motif6.47%
Average Position of motif in Targets52.0 +/- 22.7bp
Average Position of motif in Background51.1 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF682/MA1599.1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCTTH-----
NNAGGGGCTTGGCCNN
 A C G T A C G T A C G T C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

CRZ1/MA0285.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGGGCTTH-
GTGGCTNNG
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A A C G T
T A C G C A G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G

GCR1(MacIsaac)/Yeast

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GGGGCTTH--
-GGGCTTCCA
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A A C G T A C G T
A C G T A T C G A C T G C T A G G T A C G C A T A C G T A G T C A G T C G C T A

bcd/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GGGGCTTH-
-NGGATTAG
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A A C G T
A C G T T A G C T C A G C T A G G T C A A C G T G C A T C G T A C T A G

bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGGCTTH---
VNNGGATTADNN
 A C G T C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A A C G T A C G T A C G T
T C G A C T G A T A G C C T A G A C T G G T C A A C G T A G C T C G T A C T A G T A C G A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGGGCTTH
NGGGATTA
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

bcd/dmmpmm(Down)/fly

Match Rank:7
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGGGCTTH-
--GGATTAA
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A A C G T
A C G T A C G T C T A G A T C G G T C A A G C T G A C T C G T A C T G A

che-1/MA0260.1/Jaspar

Match Rank:8
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGGGCTTH
--GGTTTC
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A
A C G T A C G T A T C G A C T G A G C T A C G T A C G T A G T C

MA0260.1_che-1/Jaspar

Match Rank:9
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGGGCTTH
--GGTTTC
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A
A C G T A C G T A T C G A C T G A G C T A C G T A C G T A G T C

bcd/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GGGGCTTH-
-NGGATTAN
 C A T G A T C G T A C G A T C G A G T C G C A T G A C T G C T A A C G T
A C G T T G A C T C A G C T A G G T C A A G C T A C G T C G T A C T A G