Information for 6-CGACTCGAGT (Motif 12)

G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A G T C A C T G C G T A A T C G A G C T A T G C C A T G
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.795
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif90.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets28.4 +/- 22.4bp
Average Position of motif in Background51.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

XBP1/MA0414.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CGACTCGAGT
--NCTCGAG-
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T
A C G T A C G T A G C T A G T C A C G T A G T C A C T G C G T A C T A G A C G T

XBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGACTCGAGT-
---CTCGAGGA
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A G T C A G C T G T A C T C A G C T G A C T A G T A C G T G C A

tin/MA0247.2/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGACTCGAGT--
--TTTCAAGTGG
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T C G A T A G C T A G C T A G T C C T G A C G T A A C T G A C G T A C T G A T C G

OPI1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGACTCGAGT
-GATTCGA--
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T
A C G T A C T G C T A G A C G T A C G T A G T C A C T G C G T A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGACTCGAGT---
---CTYRAGTGSY
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

z/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGACTCGAGT
-CACTCAA--
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T
A C G T T A G C C T G A A G T C A C G T A G T C T C G A G C T A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGACTCGAGT---
---BTBRAGTGSN
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGACTCGAGT----
--HATCGATWHNDH
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C A T A G T C C T A G C G T A G C A T C G A T G A C T A T G C C T A G G C T A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGACTCGAGT--
---NTCAAGTGG
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGACTCGAGT-
---CTCAAGTG
 G T A C T A C G C T G A A T G C A C G T A G T C A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A G T C C G T A C G T A A C T G A C G T A C T G