Information for 7-GGCCCWCA (Motif 11)

A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G C T A G G T A C A G T C
p-value:1e-6
log p-value:-1.575e+01
Information Content per bp:1.860
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif7.51%
Number of Background Sequences with motif501.7
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets45.9 +/- 31.3bp
Average Position of motif in Background54.3 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCP23/MA1066.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGCCCWCA
GGGCCCAC-
 A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
C A T G C T A G A T C G A G T C A T G C G T A C T C G A A G T C A C G T

OsI_08196/MA1050.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGCCCWCA
GGGCCCAC-
 A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
A C T G C T A G A C T G A G T C A G T C A G T C T C G A A G T C A C G T

At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGCCCWCA
GGRCCCAC-
 A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T

At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGCCCWCA
GGDCCCAC-
 A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T

PCF2(TCP)/Oryza sativa/AthaMap

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGCCCWCA
TGGGGCCCAC-
 A C G T A C G T A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
G C A T C T A G C A T G T A C G T A C G T A G C A T G C A G T C C T G A A G T C A C G T

TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGCCCWCA
GGDCCCAC-
 A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
A C T G A C T G C A T G G A T C A G T C A G T C C T G A A G T C A C G T

TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.75
Offset:-8
Orientation:reverse strand
Alignment:--------GGCCCWCA
NNNNNNNRGGHCCAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
G A C T A T C G T C G A T C G A C T G A A T G C G C A T C T G A A C T G A C T G G T C A A G T C A G T C C G T A A G T C A C G T

Glyma19g26560.1/MA1019.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GGCCCWCA
GGGGCCCAC-
 A C G T A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
A C T G C A T G C T A G A T C G G A T C T G A C G A T C T C G A A G T C A C G T

TCP21/MA1287.1/Jaspar

Match Rank:9
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------GGCCCWCA
NNGTGGGGCCCACN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
C G T A C G T A T C A G G A C T C T A G C A T G C T A G C A T G G A T C A G T C A G T C C T G A A G T C G C T A

ARALYDRAFT_493022/MA1097.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGCCCWCA
GGGCCCAC-
 A C G T A C T G A C T G A G T C G T A C A G T C C G A T A G T C C G T A
A C T G A C T G A T C G G T A C A G T C A G T C C G T A A G T C A C G T