Information for 8-CKAWWWTACCCC (Motif 5)

G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C
Reverse Opposite:
C T A G A C T G C T A G C A T G A G C T C T G A G C A T C G T A G C T A A C G T G T A C A C T G
p-value:1e-78
log p-value:-1.803e+02
Information Content per bp:1.677
Number of Target Sequences with motif220.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif131.8
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets50.0 +/- 24.9bp
Average Position of motif in Background48.1 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown1/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---CKAWWWTACCCC
TTACDAWWWTACCCY
 A C G T A C G T A C G T G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C
C G A T C A G T G T C A A G T C C T A G C G T A G C T A G C T A G C T A G C A T C T G A G A T C A G T C G T A C G A C T

REB1/MA0363.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CKAWWWTACCCC-
----GTTACCCGG
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C A C G T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T C G T A A G T C A G T C A G T C A C T G A C T G

NCU02182/MA1434.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CKAWWWTACCCC-
------TACCCAC
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T A C A G T C A G T C G T C A A G T C

AT5G47660/MA1365.2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CKAWWWTACCCC
-NTTTTTACCNT
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C
A C G T C G A T G C A T G C A T G C A T G C A T G C A T C T G A A G T C G A T C C G T A G C A T

GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CKAWWWTACCCC
--WWTTTACCKY
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C
A C G T A C G T G C T A C G A T C G A T A C G T G C A T C G T A G A T C G A T C A C T G A G C T

AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CKAWWWTACCCC----
-AAAARTGCCCTTAAA
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C G T A C G T A C T G A C G A T C T A G G A T C A G T C A G T C A G C T G C A T G C T A C G T A C G T A

REB1/REB1_YPD/61-REB1(Harbison)/Yeast

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CKAWWWTACCCC
-----TTACCCG
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C
A C G T A C G T A C G T A C G T A C G T G C A T G A C T C G T A G A T C G A T C G A T C C A T G

REB1/SacCer-Promoters/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CKAWWWTACCCC--
--YYRTTACCCGGM
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C A C G T A C G T
A C G T A C G T A G C T A G C T C T A G G A C T G A C T G C T A A G T C A T G C A G T C C A T G A T C G G T A C

HAP1(MacIsaac)/Yeast

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CKAWWWTACCCC
CGATAACNCC--
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C
A T G C C T A G C T G A G C A T T C G A C G T A A G T C A G C T A T G C T A G C A C G T A C G T

AT-GTL1/MA1661.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CKAWWWTACCCC-
-NNTTTTAACCNT
 G T A C C A T G G T C A C G A T C G A T C G T A A G C T C T G A G T A C A G T C A G T C G A T C A C G T
A C G T G C T A G C A T G C A T G C A T C G A T G C A T G C T A G T C A G A T C G A T C C G T A G C A T