Information for 5-AAACGAYGTCGT (Motif 4)

G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
Reverse Opposite:
T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T G C A T A C G T
p-value:1e-88
log p-value:-2.027e+02
Information Content per bp:1.540
Number of Target Sequences with motif349.0
Percentage of Target Sequences with motif2.99%
Number of Background Sequences with motif283.1
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets48.5 +/- 25.0bp
Average Position of motif in Background50.4 +/- 40.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown2/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AAACGAYGTCGT---
AAACGACGTCGTTTT
 G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T A C G T A C G T A C G T
G C T A G C T A T G C A A G T C C T A G C T G A G A T C C T A G G A C T G A T C C T A G A C G T C G A T C G A T G A C T

AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAACGAYGTCGT
NDWCGAHDTCGW
 G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
G C T A C G T A G C A T G A T C C T A G C G T A G C A T C G T A G C A T A G T C C T A G C G T A

UPC2/MA0411.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAACGAYGTCGT
TATACGA------
 A C G T G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
A G C T C T G A C G A T C G T A A G T C C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAACGAYGTCGT---
TNAACGACGTCGNCCA
 A C G T G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAACGAYGTCGT
-NACGACGA---
 G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
A C G T C T G A C T G A A G T C A C T G C T G A A G T C A C T G G T C A A C G T A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AAACGAYGTCGT
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

STP2/MA0395.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAACGAYGTCGT-------
TGATCGGCGCCGCACGACGA
 A C G T G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G T C G A G C A T A G T C T C A G C T A G G A T C A T C G A T G C A T G C A C T G G A T C C T G A A G T C T A C G G T C A G T A C A C T G G C T A

Os05g0497200/MA1034.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAACGAYGTCGT
---CGGCGGCG-
 G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
A C G T A C G T A C G T A G C T A C T G A C T G A G T C A C T G A T C G A G T C A C T G A C G T

LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAACGAYGTCGT
-GACGGCGGHG-
 G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
A C G T C A T G C T G A A G T C A C T G A C T G A G T C A C T G A T C G G T C A C T A G A C G T

TGA2/MA1068.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAACGAYGTCGT
----GATGACGT
 G T C A C G T A T G C A G A T C C A T G T C G A G A T C C T A G A G C T G T A C C T A G A C G T
A C G T A C G T A C G T A C G T A T C G T G C A G A C T A C T G C G T A A G T C T C A G G A C T