Information for 4-GACACGTG (Motif 2)

C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G
Reverse Opposite:
A G T C C T G A A G T C C T A G A G C T C T A G C A G T G T A C
p-value:1e-407
log p-value:-9.380e+02
Information Content per bp:1.855
Number of Target Sequences with motif1507.0
Percentage of Target Sequences with motif12.89%
Number of Background Sequences with motif1189.1
Percentage of Background Sequences with motif3.46%
Average Position of motif in Targets50.1 +/- 25.9bp
Average Position of motif in Background52.2 +/- 42.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ABI5/MA0931.1/Jaspar

Match Rank:1
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-GACACGTG-
TGACACGTGG
 A C G T C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G A C G T
A C G T A C T G G T C A A T G C C G T A A G T C A C T G A C G T C T A G A C T G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GACACGTG
GHCACGTG
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GACACGTG
GCCACGTG
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G
A C T G G T A C A G T C C G T A A G T C C T A G A G C T T A C G

E-box/Arabidopsis-Promoters/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GACACGTG
GCCACGTG
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G
A C T G G T A C A G T C C T G A A T G C A C T G A G C T T A C G

ABF2/MA0941.1/Jaspar

Match Rank:5
Score:0.96
Offset:-3
Orientation:forward strand
Alignment:---GACACGTG--
CATGACACGTGTT
 A C G T A C G T A C G T C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G A C G T A C G T
A G T C C G T A A G C T C T A G T G C A A G T C C G T A A G T C A C T G A C G T C T A G C A G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GACACGTG--
NACACGTGCN
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G A C G T A C G T
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GACACGTG-
-ACACGTGC
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G A C G T
A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GACACGTG
GNCACGTG
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GACACGTG
GCCACGTG
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G
A C T G G T A C A G T C C G T A A G T C A C T G A C G T T A C G

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GACACGTG
NVCACGTG
 C A T G G T C A A G T C C T G A A G T C A C T G A G C T C T A G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G