Information for 1-WWRGGCCCAWWW (Motif 1)

G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
Reverse Opposite:
G C T A C G T A C G T A G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A C G T A
p-value:1e-836
log p-value:-1.927e+03
Information Content per bp:1.519
Number of Target Sequences with motif2279.0
Percentage of Target Sequences with motif19.50%
Number of Background Sequences with motif1395.6
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets50.9 +/- 24.7bp
Average Position of motif in Background48.4 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PCF/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-WWRGGCCCAWWW--
NHHARGCCCAWWWNN
 A C G T G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T A C G T A C G T
G C T A G C T A G C A T G C T A C T A G A C T G A G T C A G T C A G T C C G T A G C A T G C A T C G T A C G T A C G T A

OsI_08196/MA1050.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:WWRGGCCCAWWW
--GGGCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A C G T A C T G C T A G A C T G A G T C A G T C A G T C T C G A A G T C A C G T A C G T

TCP23/MA1066.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:forward strand
Alignment:WWRGGCCCAWWW
--GGGCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A C G T C A T G C T A G A T C G A G T C A T G C G T A C T C G A A G T C A C G T A C G T

TCP8/MA1428.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:WWRGGCCCAWWW
-GGGGCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A T C G C A T G C T A G A T C G G T A C T G A C G A T C C T G A A G T C A C G T A C G T

At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.74
Offset:2
Orientation:forward strand
Alignment:WWRGGCCCAWWW
--GGRCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A C G T A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T A C G T

OJ1581_H09.2/MA1031.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:WWRGGCCCAWWW
GTGGGCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
C A T G A C G T A C T G A C T G C T A G G A T C A G T C G T A C T G C A G T A C A C G T A C G T

At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:WWRGGCCCAWWW
--GGDCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A C G T A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T A C G T

Glyma19g26560.1/MA1019.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:WWRGGCCCAWWW
-GGGGCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A C T G C A T G C T A G A T C G G A T C T G A C G A T C T C G A A G T C A C G T A C G T

ARALYDRAFT_484486/MA1098.1/Jaspar

Match Rank:9
Score:0.73
Offset:2
Orientation:forward strand
Alignment:WWRGGCCCAWWW
--GGCCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A C G T A C T G C T A G A T C G A G T C A G T C A G T C C G T A A G T C A C G T A C G T

ARALYDRAFT_495258/MA1095.1/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:WWRGGCCCAWWW
--GGCCCCAC--
 G C A T G C A T C T A G C T A G C T A G G A T C G A T C G A T C C G T A G C A T G C A T C G A T
A C G T A C G T A C T G C T A G A T C G A G T C A G T C A G T C C G T A A G T C A C G T A C G T