Information for 4-GGGAA (Motif 13)

A C U G A C U G C U A G C U G A C G U A
Reverse Opposite:
A C G U A G C U A G U C A G U C A G U C
p-value:1e-4
log p-value:-1.043e+01
Information Content per bp:1.872
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif47.50%
Number of Background Sequences with motif11799.1
Percentage of Background Sequences with motif29.67%
Average Position of motif in Targets49.8 +/- 28.4bp
Average Position of motif in Background50.5 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4755-5p MIMAT0019895 Homo sapiens miR-4755-5p Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-16
Orientation:forward strand
Alignment:----------------GGGAA-
AAAGCCAGGCTCTGAAGGGAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U
C G U A C G U A C G U A A C U G A G U C A G U C C G U A A C U G A C U G A G U C A C G U A G U C A C G U A C U G C G U A C G U A A C U G A C U G A C U G C G U A C G U A C G U A

hsa-miR-3679-3p MIMAT0018105 Homo sapiens miR-3679-3p Targets (miRBase)

Match Rank:2
Score:0.70
Offset:-16
Orientation:forward strand
Alignment:----------------GGGAA-
GATGAAGATTACTGGGGGGAAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U
A C U G C G U A A C G U A C U G C G U A C G U A A C U G C G U A A C G U A C G U C G U A A G U C A C G U A C U G A C U G A C U G A C U G A C U G A C U G C G U A C G U A A C U G

hsa-miR-3938 MIMAT0018353 Homo sapiens miR-3938 Targets (miRBase)

Match Rank:3
Score:0.70
Offset:-15
Orientation:forward strand
Alignment:---------------GGGAA--
CCGGGTTATCTACAAGGGAATT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U A C G U
A G U C A G U C A C U G A C U G A C U G A C G U A C G U C G U A A C G U A G U C A C G U C G U A A G U C C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C G U A C G U

hsa-miR-4446-5p MIMAT0019233 Homo sapiens miR-4446-5p Targets (miRBase)

Match Rank:4
Score:0.70
Offset:-15
Orientation:forward strand
Alignment:---------------GGGAA--
GCCAAGGGAATGGCAGGGAAAT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U A C G U
A C U G A G U C A G U C C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C G U A C U G A C U G A G U C C G U A A C U G A C U G A C U G C G U A C G U A C G U A A C G U

hsa-miR-3124-3p MIMAT0019200 Homo sapiens miR-3124-3p Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------GGGAA--
ACTTCACGGGAGTGAGGAAAGT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U A C G U
C G U A A G U C A C G U A C G U A G U C C G U A A G U C A C U G A C U G A C U G C G U A A C U G A C G U A C U G C G U A A C U G A C U G C G U A C G U A C G U A A C U G A C G U

hsa-miR-617 MIMAT0003286 Homo sapiens miR-617 Targets (miRBase)

Match Rank:6
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------GGGAA----
GCCACCTTCAAATGGGAAGTCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U A C G U A C G U A C G U
A C U G A G U C A G U C C G U A A G U C A G U C A C G U A C G U A G U C C G U A C G U A C G U A A C G U A C U G A C U G A C U G C G U A C G U A A C U G A C G U A G U C A C G U

hsa-miR-1236 MIMAT0005591 Homo sapiens miR-1236 Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------GGGAA----
CTGGAGAGACAAGGGGAAGAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U A C G U A C G U A C G U
A G U C A C G U A C U G A C U G C G U A A C U G C G U A A C U G C G U A A G U C C G U A C G U A A C U G A C U G A C U G A C U G C G U A C G U A A C U G C G U A A C U G A C U G

hsa-miR-211 MIMAT0000268 Homo sapiens miR-211 Targets (miRBase)

Match Rank:8
Score:0.60
Offset:-17
Orientation:forward strand
Alignment:-----------------GGGAA
AGGCGAAGGATGACAAAGGGAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A
C G U A A C U G A C U G A G U C A C U G C G U A C G U A A C U G A C U G C G U A A C G U A C U G C G U A A G U C C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A

hsa-miR-204 MIMAT0000265 Homo sapiens miR-204 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-17
Orientation:forward strand
Alignment:-----------------GGGAA
AGGCATAGGATGACAAAGGGAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A
C G U A A C U G A C U G A G U C C G U A A C G U C G U A A C U G A C U G C G U A A C G U A C U G C G U A A G U C C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A

hsa-miR-2355-5p MIMAT0016895 Homo sapiens miR-2355-5p Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-15
Orientation:forward strand
Alignment:---------------GGGAA-
TTGTCCATTGTATCTGGGGAT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C U G C U A G C U G A C G U A A C G U
A C G U A C G U A C U G A C G U A G U C A G U C C G U A A C G U A C G U A C U G A C G U C G U A A C G U A G U C A C G U A C U G A C U G A C U G A C U G C G U A A C G U