Information for 1-ATCGTAG (Motif 1)

U C G A A C G U A U G C A U C G A G C U C G U A C U A G
Reverse Opposite:
A G U C A C G U C U G A U A G C A U C G U G C A A G C U
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.794
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif540.8
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets50.4 +/- 28.3bp
Average Position of motif in Background52.1 +/- 41.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-645 MIMAT0003315 Homo sapiens miR-645 Targets (miRBase)

Match Rank:1
Score:0.62
Offset:-11
Orientation:forward strand
Alignment:-----------ATCGTAG-
TCAGCAGTACCAGCCTAGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U
A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U C G U A A G U C A G U C C G U A A C U G A G U C A G U C A C G U C G U A A C U G C G U A

hsa-miR-651 MIMAT0003321 Homo sapiens miR-651 Targets (miRBase)

Match Rank:2
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------ATCGTAG-
CAAAAGTCAAGCTTATCCTAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U
A G U C C G U A C G U A C G U A C G U A A C U G A C G U A G U C C G U A C G U A A C U G A G U C A C G U A C G U C G U A A C G U A G U C A G U C A C G U C G U A C G U A C G U A

hsa-miR-4679 MIMAT0019763 Homo sapiens miR-4679 Targets (miRBase)

Match Rank:3
Score:0.57
Offset:-14
Orientation:forward strand
Alignment:--------------ATCGTAG-
AGCAAAGAATCTCTATCACAGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U
C G U A A C U G A G U C C G U A C G U A C G U A A C U G C G U A C G U A A C G U A G U C A C G U A G U C A C G U C G U A A C G U A G U C C G U A A G U C C G U A A C U G C G U A

hsa-miR-4266 MIMAT0016892 Homo sapiens miR-4266 Targets (miRBase)

Match Rank:4
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------ATCGTAG
GGCCAAGGCCTCCTAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G
A C U G A C U G A G U C A G U C C G U A C G U A A C U G A C U G A G U C A G U C A C G U A G U C A G U C A C G U C G U A A C U G

hsa-miR-4330 MIMAT0016924 Homo sapiens miR-4330 Targets (miRBase)

Match Rank:5
Score:0.56
Offset:-11
Orientation:forward strand
Alignment:-----------ATCGTAG-
GCAAGGCTCTGATCTGAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U
A C U G A G U C C G U A C G U A A C U G A C U G A G U C A C G U A G U C A C G U A C U G C G U A A C G U A G U C A C G U A C U G C G U A A C U G A C U G

hsa-miR-3135 MIMAT0015001 Homo sapiens miR-3135 Targets (miRBase)

Match Rank:6
Score:0.56
Offset:-12
Orientation:forward strand
Alignment:------------ATCGTAG---
CACTGCAGTCTCAGCCTAGGCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U A C G U A C G U
A G U C C G U A A G U C A C G U A C U G A G U C C G U A A C U G A C G U A G U C A C G U A G U C C G U A A C U G A G U C A G U C A C G U C G U A A C U G A C U G A G U C C G U A

hsa-miR-191* MIMAT0001618 Homo sapiens miR-191* Targets (miRBase)

Match Rank:7
Score:0.56
Offset:-14
Orientation:forward strand
Alignment:--------------ATCGTAG-
GGGGACGAAATCCAAGCGCAGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U
A C U G A C U G A C U G A C U G C G U A A G U C A C U G C G U A C G U A C G U A A C G U A G U C A G U C C G U A C G U A A C U G A G U C A C U G A G U C C G U A A C U G A G U C

hsa-miR-2392 MIMAT0019043 Homo sapiens miR-2392 Targets (miRBase)

Match Rank:8
Score:0.55
Offset:-14
Orientation:forward strand
Alignment:--------------ATCGTAG
CACCTCTCACCCCCATCCTA-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G
A G U C C G U A A G U C A G U C A C G U A G U C A C G U A G U C C G U A A G U C A G U C A G U C A G U C A G U C C G U A A C G U A G U C A G U C A C G U C G U A A C G U

hsa-let-7d* MIMAT0004484 Homo sapiens let-7d* Targets (miRBase)

Match Rank:9
Score:0.54
Offset:-13
Orientation:forward strand
Alignment:-------------ATCGTAG--
AGAAAGGCAGCAGGTCGTATAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U A C G U
C G U A A C U G C G U A C G U A C G U A A C U G A C U G A G U C C G U A A C U G A G U C C G U A A C U G A C U G A C G U A G U C A C U G A C G U C G U A A C G U C G U A A C U G

hsa-miR-187* MIMAT0004561 Homo sapiens miR-187* Targets (miRBase)

Match Rank:10
Score:0.54
Offset:-13
Orientation:forward strand
Alignment:-------------ATCGTAG--
GCCCGGGTCCTGTGTTGTAGCC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U C G A A C G U A U G C A U C G A G C U C G U A C U A G A C G U A C G U
A C U G A G U C A G U C A G U C A C U G A C U G A C U G A C G U A G U C A G U C A C G U A C U G A C G U A C U G A C G U A C G U A C U G A C G U C G U A A C U G A G U C A G U C