Information for 3-GTTGT (Motif 9)

A C U G A C G U A G C U A C U G A G C U
Reverse Opposite:
C U G A A G U C C U G A C G U A A G U C
p-value:1e-4
log p-value:-1.132e+01
Information Content per bp:1.878
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif30.83%
Number of Background Sequences with motif6027.3
Percentage of Background Sequences with motif15.20%
Average Position of motif in Targets48.1 +/- 25.7bp
Average Position of motif in Background50.6 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-549 MIMAT0003333 Homo sapiens miR-549 Targets (miRBase)

Match Rank:1
Score:0.71
Offset:-14
Orientation:forward strand
Alignment:--------------GTTGT--
AGAGCTCATCCATAGTTGTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U A C G U A C G U
C G U A A C U G C G U A A C U G A G U C A C G U A G U C C G U A A C G U A G U C A G U C C G U A A C G U C G U A A C U G A C G U A C G U A C U G A C G U A G U C C G U A

hsa-miR-4709-5p MIMAT0019811 Homo sapiens miR-4709-5p Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-17
Orientation:forward strand
Alignment:-----------------GTTGT
TTGGAGAGCAAGTCACTGTTGT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U
A C G U A C G U A C U G A C U G C G U A A C U G C G U A A C U G A G U C C G U A C G U A A C U G A C G U A G U C C G U A A G U C A C G U A C U G A C G U A C G U A C U G A C G U

hsa-miR-4772-3p MIMAT0019927 Homo sapiens miR-4772-3p Targets (miRBase)

Match Rank:3
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------GTTGT---
TCTGATCAGGCAAAGTTGCAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U A C G U A C G U A C G U
A C G U A G U C A C G U A C U G C G U A A C G U A G U C C G U A A C U G A C U G A G U C C G U A C G U A C G U A A C U G A C G U A C G U A C U G A G U C C G U A A C U G A C U G

hsa-miR-196a* MIMAT0004562 Homo sapiens miR-196a* Targets (miRBase)

Match Rank:4
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------GTTGT--
CTCAGGCAGTTTCTTGTTGCCG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U A C G U A C G U
A G U C A C G U A G U C C G U A A C U G A C U G A G U C C G U A A C U G A C G U A C G U A C G U A G U C A C G U A C G U A C U G A C G U A C G U A C U G A G U C A G U C A C U G

hsa-miR-891b MIMAT0004913 Homo sapiens miR-891b Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-16
Orientation:forward strand
Alignment:----------------GTTGT-
TCAATGACTCAGGTAAGTTGCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U A C G U
A C G U A G U C C G U A C G U A A C G U A C U G C G U A A G U C A C G U A G U C C G U A A C U G A C U G A C G U C G U A C G U A A C U G A C G U A C G U A C U G A G U C C G U A

hsa-miR-891a MIMAT0004902 Homo sapiens miR-891a Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-16
Orientation:forward strand
Alignment:----------------GTTGT-
TCAGTGGCTCAGGTTCGTTGCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U A C G U
A C G U A G U C C G U A A C U G A C G U A C U G A C U G A G U C A C G U A G U C C G U A A C U G A C U G A C G U A C G U A G U C A C U G A C G U A C G U A C U G A G U C C G U A

hsa-let-7b* MIMAT0004482 Homo sapiens let-7b* Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------GTTGT----
GGGAAGGCAGTAGGTTGTATAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U A C G U A C G U A C G U A C G U
A C U G A C U G A C U G C G U A C G U A A C U G A C U G A G U C C G U A A C U G A C G U C G U A A C U G A C U G A C G U A C G U A C U G A C G U C G U A A C G U C G U A A C U G

hsa-miR-187* MIMAT0004561 Homo sapiens miR-187* Targets (miRBase)

Match Rank:8
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------GTTGT----
GCCCGGGTCCTGTGTTGTAGCC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U A C G U A C G U A C G U A C G U
A C U G A G U C A G U C A G U C A C U G A C U G A C U G A C G U A G U C A G U C A C G U A C U G A C G U A C U G A C G U A C G U A C U G A C G U C G U A A C U G A G U C A G U C

hsa-miR-4714-3p MIMAT0019823 Homo sapiens miR-4714-3p Targets (miRBase)

Match Rank:9
Score:0.59
Offset:-17
Orientation:forward strand
Alignment:-----------------GTTGT
CAACTCTGACCACCTAGGTTGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U
A G U C C G U A C G U A A G U C A C G U A G U C A C G U A C U G C G U A A G U C A G U C C G U A A G U C A G U C A C G U C G U A A C U G A C U G A C G U A C G U A C U G A C U G

hsa-miR-3065-5p MIMAT0015066 Homo sapiens miR-3065-5p Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-18
Orientation:forward strand
Alignment:------------------GTTGT
TCCAGCATCAGTGATTTTGTTGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U A G C U A C U G A G C U
A C G U A G U C A G U C C G U A A C U G A G U C C G U A A C G U A G U C C G U A A C U G A C G U A C U G C G U A A C G U A C G U A C G U A C G U A C U G A C G U A C G U A C U G C G U A