Information for 4-CCATTGC (Motif 5)

A G U C A G U C C G U A A C G U A C G U A C U G A G U C
Reverse Opposite:
A C U G A G U C C G U A C G U A A C G U A C U G A C U G
p-value:1e-8
log p-value:-1.882e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif9.17%
Number of Background Sequences with motif330.7
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets52.2 +/- 21.0bp
Average Position of motif in Background48.2 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-106a* MIMAT0004517 Homo sapiens miR-106a* Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-13
Orientation:forward strand
Alignment:-------------CCATTGC--
GTAAGAAGTGCTTACATTGCAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U
A C U G A C G U C G U A C G U A A C U G C G U A C G U A A C U G A C G U A C U G A G U C A C G U A C G U C G U A A G U C C G U A A C G U A C G U A C U G A G U C C G U A A C U G

hsa-miR-3908 MIMAT0018182 Homo sapiens miR-3908 Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-13
Orientation:forward strand
Alignment:-------------CCATTGC--
AAACAGTCTACCTACATTGCTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U
C G U A C G U A C G U A A G U C C G U A A C U G A C G U A G U C A C G U C G U A A G U C A G U C A C G U C G U A A G U C C G U A A C G U A C G U A C U G A G U C A C G U A G U C

hsa-miR-4766-3p MIMAT0019918 Homo sapiens miR-4766-3p Targets (miRBase)

Match Rank:3
Score:0.65
Offset:-11
Orientation:forward strand
Alignment:-----------CCATTGC---
TTCCAAAAGAGCAATTGCTAT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U A C G U
A C G U A C G U A G U C A G U C C G U A C G U A C G U A C G U A A C U G C G U A A C U G A G U C C G U A C G U A A C G U A C G U A C U G A G U C A C G U C G U A A C G U

hsa-miR-518a-5p MIMAT0005457 Homo sapiens miR-518a-5p Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-11
Orientation:forward strand
Alignment:-----------CCATTGC--
GAAAGGGCTTCCCTTTGCAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U
A C U G C G U A C G U A C G U A A C U G A C U G A C U G A G U C A C G U A C G U A G U C A G U C A G U C A C G U A C G U A C G U A C U G A G U C C G U A A C U G

hsa-miR-527 MIMAT0002862 Homo sapiens miR-527 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-11
Orientation:forward strand
Alignment:-----------CCATTGC--
GAAAGGGCTTCCCTTTGCAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U
A C U G C G U A C G U A C G U A A C U G A C U G A C U G A G U C A C G U A C G U A G U C A G U C A G U C A C G U A C G U A C G U A C U G A G U C C G U A A C U G

hsa-miR-182 MIMAT0000259 Homo sapiens miR-182 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------CCATTGC----
AGTGTGAGTTCTACCATTGCCAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U A C G U A C G U
C G U A A C U G A C G U A C U G A C G U A C U G C G U A A C U G A C G U A C G U A G U C A C G U C G U A A G U C A G U C C G U A A C G U A C G U A C U G A G U C A G U C C G U A C G U A C G U A

hsa-miR-4506 MIMAT0019042 Homo sapiens miR-4506 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------CCATTGC
TTGCCTCAGACCACCCATTT-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C
A C G U A C G U A C U G A G U C A G U C A C G U A G U C C G U A A C U G C G U A A G U C A G U C C G U A A G U C A G U C A G U C C G U A A C G U A C G U A C G U A C G U

hsa-miR-4295 MIMAT0016844 Homo sapiens miR-4295 Targets (miRBase)

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CCATTGC----
AAGGAAAACATTGCACTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U A C G U A C G U
C G U A C G U A A C U G A C U G C G U A C G U A C G U A C G U A A G U C C G U A A C G U A C G U A C U G A G U C C G U A A G U C A C G U A C U G

hsa-miR-4519 MIMAT0019056 Homo sapiens miR-4519 Targets (miRBase)

Match Rank:9
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------CCATTGC--
CAGCCCTGCGCACTGCTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U
A G U C C G U A A C U G A G U C A G U C A G U C A C G U A C U G A G U C A C U G A G U C C G U A A G U C A C G U A C U G A G U C A C G U A C U G

hsa-miR-548al MIMAT0019024 Homo sapiens miR-548al Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-11
Orientation:forward strand
Alignment:-----------CCATTGC----
TGGTACAAAAGTCATTGCCGTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A G U C C G U A A C G U A C G U A C U G A G U C A C G U A C G U A C G U A C G U
A C G U A C U G A C U G A C G U C G U A A G U C C G U A C G U A C G U A C G U A A C U G A C G U A G U C C G U A A C G U A C G U A C U G A G U C A G U C A C U G A C G U A C G U