Information for 1-ATCCGA (Motif 3)

C G U A A G C U U G A C G A U C A C U G U G C A
Reverse Opposite:
A C G U U G A C C U A G A C U G C U G A G C A U
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.743
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif38.33%
Number of Background Sequences with motif6183.3
Percentage of Background Sequences with motif15.59%
Average Position of motif in Targets56.8 +/- 29.6bp
Average Position of motif in Background50.5 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4330 MIMAT0016924 Homo sapiens miR-4330 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-11
Orientation:forward strand
Alignment:-----------ATCCGA--
GCAAGGCTCTGATCTGAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A A C G U A C G U
A C U G A G U C C G U A C G U A A C U G A C U G A G U C A C G U A G U C A C G U A C U G C G U A A C G U A G U C A C G U A C U G C G U A A C U G A C U G

hsa-miR-3942-3p MIMAT0019230 Homo sapiens miR-3942-3p Targets (miRBase)

Match Rank:2
Score:0.70
Offset:-13
Orientation:forward strand
Alignment:-------------ATCCGA--
ATGTAATACTGTTATCTGAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A A C G U A C G U
C G U A A C G U A C U G A C G U C G U A C G U A A C G U C G U A A G U C A C G U A C U G A C G U A C G U C G U A A C G U A G U C A C G U A C U G C G U A C G U A C G U A

hsa-miR-127-3p MIMAT0000446 Homo sapiens miR-127-3p Targets (miRBase)

Match Rank:3
Score:0.70
Offset:-16
Orientation:forward strand
Alignment:----------------ATCCGA
AGCCAAGCTCAGACGGATCCGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A
C G U A A C U G A G U C A G U C C G U A C G U A A C U G A G U C A C G U A G U C C G U A A C U G C G U A A G U C A C U G A C U G C G U A A C G U A G U C A G U C A C U G C G U A

hsa-miR-4762-3p MIMAT0019911 Homo sapiens miR-4762-3p Targets (miRBase)

Match Rank:4
Score:0.68
Offset:-14
Orientation:forward strand
Alignment:--------------ATCCGA--
CACCACAAATCTTGATCAGAAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A A C G U A C G U
A G U C C G U A A G U C A G U C C G U A A G U C C G U A C G U A C G U A A C G U A G U C A C G U A C G U A C U G C G U A A C G U A G U C C G U A A C U G C G U A C G U A A C U G

hsa-miR-3610 MIMAT0017987 Homo sapiens miR-3610 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-11
Orientation:forward strand
Alignment:-----------ATCCGA---
CGGCGCCTCCTTTCCGATTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A A C G U A C G U A C G U
A G U C A C U G A C U G A G U C A C U G A G U C A G U C A C G U A G U C A G U C A C G U A C G U A C G U A G U C A G U C A C U G C G U A A C G U A C G U A G U C

hsa-miR-105* MIMAT0004516 Homo sapiens miR-105* Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-16
Orientation:forward strand
Alignment:----------------ATCCGA
TAGCACATGCTCAAACATCCGT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A
A C G U C G U A A C U G A G U C C G U A A G U C C G U A A C G U A C U G A G U C A C G U A G U C C G U A C G U A C G U A A G U C C G U A A C G U A G U C A G U C A C U G A C G U

hsa-miR-1245b-3p MIMAT0019951 Homo sapiens miR-1245b-3p Targets (miRBase)

Match Rank:7
Score:0.62
Offset:-16
Orientation:forward strand
Alignment:----------------ATCCGA
TATAGGCCTTTAGATCATCTGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A
A C G U C G U A A C G U C G U A A C U G A C U G A G U C A G U C A C G U A C G U A C G U C G U A A C U G C G U A A C G U A G U C C G U A A C G U A G U C A C G U A C U G C G U A

hsa-miR-651 MIMAT0003321 Homo sapiens miR-651 Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-14
Orientation:forward strand
Alignment:--------------ATCCGA--
CAAAAGTCAAGCTTATCCTAAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A A C G U A C G U
A G U C C G U A C G U A C G U A C G U A A C U G A C G U A G U C C G U A C G U A A C U G A G U C A C G U A C G U C G U A A C G U A G U C A G U C A C G U C G U A C G U A C G U A

hsa-miR-3917 MIMAT0018191 Homo sapiens miR-3917 Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-12
Orientation:forward strand
Alignment:------------ATCCGA--
CCCACCTGCTCAGTCCGAGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A A C G U A C G U
A G U C A G U C A G U C C G U A A G U C A G U C A C G U A C U G A G U C A C G U A G U C C G U A A C U G A C G U A G U C A G U C A C U G C G U A A C U G A G U C

hsa-miR-4654 MIMAT0019720 Homo sapiens miR-4654 Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------ATCCGA--
CCAGATGCCTCCAGATCCCACA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U U G A C G A U C A C U G U G C A A C G U A C G U
A G U C A G U C C G U A A C U G C G U A A C G U A C U G A G U C A G U C A C G U A G U C A G U C C G U A A C U G C G U A A C G U A G U C A G U C A G U C C G U A A G U C C G U A