Information for 2-TTCGGGA (Motif 2)

A C G U A C G U A U G C A C U G A C U G A C U G C U G A
Reverse Opposite:
A G C U U G A C G U A C A G U C A U C G G U C A G U C A
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.809
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif17.50%
Number of Background Sequences with motif1301.7
Percentage of Background Sequences with motif3.28%
Average Position of motif in Targets52.2 +/- 29.5bp
Average Position of motif in Background49.0 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4798-3p MIMAT0019975 Homo sapiens miR-4798-3p Targets (miRBase)

Match Rank:1
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------TTCGGGA---
ACTTCGGTATACTTCGTGAGTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U A C G U A C G U
C G U A A G U C A C G U A C G U A G U C A C U G A C U G A C G U C G U A A C G U C G U A A G U C A C G U A C G U A G U C A C U G A C G U A C U G C G U A A C U G A C G U A C G U

hsa-miR-4671-5p MIMAT0019752 Homo sapiens miR-4671-5p Targets (miRBase)

Match Rank:2
Score:0.58
Offset:-16
Orientation:forward strand
Alignment:----------------TTCGGGA
AGATTAGCGCACAGTCTTCGGT-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A
C G U A A C U G C G U A A C G U A C G U C G U A A C U G A G U C A C U G A G U C C G U A A G U C C G U A A C U G A C G U A G U C A C G U A C G U A G U C A C U G A C U G A C G U A C G U

hsa-miR-4281 MIMAT0016907 Homo sapiens miR-4281 Targets (miRBase)

Match Rank:3
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------TTCGGGA---
CCCCCCTCCCCGGGACCC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U A C G U A C G U
A G U C A G U C A G U C A G U C A G U C A G U C A C G U A G U C A G U C A G U C A G U C A C U G A C U G A C U G C G U A A G U C A G U C A G U C

hsa-miR-519e* MIMAT0002828 Homo sapiens miR-519e* Targets (miRBase)

Match Rank:4
Score:0.55
Offset:-14
Orientation:forward strand
Alignment:--------------TTCGGGA-
GAAAGTGCTCCCTTTTGGAGAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U
A C U G C G U A C G U A C G U A A C U G A C G U A C U G A G U C A C G U A G U C A G U C A G U C A C G U A C G U A C G U A C G U A C U G A C U G C G U A A C U G C G U A C G U A

hsa-miR-188-3p MIMAT0004613 Homo sapiens miR-188-3p Targets (miRBase)

Match Rank:5
Score:0.55
Offset:-13
Orientation:forward strand
Alignment:-------------TTCGGGA-
TGCAAACCCTGCATGTGGGAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U
A C G U A C U G A G U C C G U A C G U A C G U A A G U C A G U C A G U C A C G U A C U G A G U C C G U A A C G U A C U G A C G U A C U G A C U G A C U G C G U A A C U G

hsa-miR-515-5p MIMAT0002826 Homo sapiens miR-515-5p Targets (miRBase)

Match Rank:6
Score:0.54
Offset:-16
Orientation:forward strand
Alignment:----------------TTCGGGA-
CAGAAAGTGCTTTCTTTTGGAGAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U
A G U C C G U A A C U G C G U A C G U A C G U A A C U G A C G U A C U G A G U C A C G U A C G U A C G U A G U C A C G U A C G U A C G U A C G U A C U G A C U G C G U A A C U G C G U A C G U A

hsa-miR-4449 MIMAT0018968 Homo sapiens miR-4449 Targets (miRBase)

Match Rank:7
Score:0.52
Offset:-13
Orientation:forward strand
Alignment:-------------TTCGGGA--
TGCCTCGCGCAGCCCCGGGACG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U A C G U
A C G U A C U G A G U C A G U C A C G U A G U C A C U G A G U C A C U G A G U C C G U A A C U G A G U C A G U C A G U C A G U C A C U G A C U G A C U G C G U A A G U C A C U G

hsa-miR-4719 MIMAT0019832 Homo sapiens miR-4719 Targets (miRBase)

Match Rank:8
Score:0.52
Offset:-15
Orientation:forward strand
Alignment:---------------TTCGGGA
CCTGCATATTATAGATTTGTGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A
A G U C A G U C A C G U A C U G A G U C C G U A A C G U C G U A A C G U A C G U C G U A A C G U C G U A A C U G C G U A A C G U A C G U A C G U A C U G A C G U A C U G C G U A

hsa-miR-516a-5p MIMAT0004770 Homo sapiens miR-516a-5p Targets (miRBase)

Match Rank:9
Score:0.52
Offset:-15
Orientation:forward strand
Alignment:---------------TTCGGGA-
GAAAGTGCTTCTTTCCTCGAGAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U
A C U G C G U A C G U A C G U A A C U G A C G U A C U G A G U C A C G U A C G U A G U C A C G U A C G U A C G U A G U C A G U C A C G U A G U C A C U G C G U A A C U G C G U A C G U A

hsa-miR-34c-3p MIMAT0004677 Homo sapiens miR-34c-3p Targets (miRBase)

Match Rank:10
Score:0.52
Offset:-13
Orientation:forward strand
Alignment:-------------TTCGGGA--
CCTGGCCGTGTGGTTAGTGATT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C A C U G A C U G A C U G C U G A A C G U A C G U
A G U C A G U C A C G U A C U G A C U G A G U C A G U C A C U G A C G U A C U G A C G U A C U G A C U G A C G U A C G U C G U A A C U G A C G U A C U G C G U A A C G U A C G U