Information for 5-CGATTT (Motif 11)

A G U C A C U G C G U A A C G U A C G U A C G U
Reverse Opposite:
C G U A C G U A C G U A A C G U A G U C A C U G
p-value:1e-4
log p-value:-1.045e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif5.83%
Number of Background Sequences with motif285.6
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets62.1 +/- 22.1bp
Average Position of motif in Background49.1 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-3610 MIMAT0017987 Homo sapiens miR-3610 Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-14
Orientation:forward strand
Alignment:--------------CGATTT
CGGCGCCTCCTTTCCGATTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U
A G U C A C U G A C U G A G U C A C U G A G U C A G U C A C G U A G U C A G U C A C G U A C G U A C G U A G U C A G U C A C U G C G U A A C G U A C G U A G U C

hsa-miR-548c-3p MIMAT0003285 Homo sapiens miR-548c-3p Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-13
Orientation:forward strand
Alignment:-------------CGATTT---
GCAAAAGTAATTGAGATTTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U A C G U A C G U
A C U G A G U C C G U A C G U A C G U A C G U A A C U G A C G U C G U A C G U A A C G U A C G U A C U G C G U A A C U G C G U A A C G U A C G U A C G U A C G U A C G U A C U G

hsa-miR-4762-5p MIMAT0019910 Homo sapiens miR-4762-5p Targets (miRBase)

Match Rank:3
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------CGATTT--
AGGCTTCTGATCAAGATTTGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U A C G U
C G U A A C U G A C U G A G U C A C G U A C G U A G U C A C G U A C U G C G U A A C G U A G U C C G U A C G U A A C U G C G U A A C G U A C G U A C G U A C U G A C U G

hsa-miR-518d-3p MIMAT0002864 Homo sapiens miR-518d-3p Targets (miRBase)

Match Rank:4
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------CGATTT-
GCTCCAAAGGGAAGCGCTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U
A C U G A G U C A C G U A G U C A G U C C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A C U G

hsa-miR-518f MIMAT0002842 Homo sapiens miR-518f Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------CGATTT-
CCTCTAAAGAGAAGCGCTTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U
A G U C A G U C A C G U A G U C A C G U C G U A C G U A C G U A A C U G C G U A A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A G U C

hsa-miR-4694-3p MIMAT0019787 Homo sapiens miR-4694-3p Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------CGATTT-
AGGTGTTATCCTGTCCATTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U
C G U A A C U G A C U G A C G U A C U G A C G U A C G U C G U A A C G U A G U C A G U C A C G U A C U G A C G U A G U C A G U C C G U A A C G U A C G U A C G U A C U G

hsa-miR-424* MIMAT0004749 Homo sapiens miR-424* Targets (miRBase)

Match Rank:7
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------CGATTT-
ATAGCAGCGCCTCACGTTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U
C G U A A C G U C G U A A C U G A G U C C G U A A C U G A G U C A C U G A G U C A G U C A C G U A G U C C G U A A G U C A C U G A C G U A C G U A C G U A C G U A C U G

hsa-miR-10a* MIMAT0004555 Homo sapiens miR-10a* Targets (miRBase)

Match Rank:8
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------CGATTT--
TATTCCCCTAGATACGAATTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U A C G U
A C G U C G U A A C G U A C G U A G U C A G U C A G U C A G U C A C G U C G U A A C U G C G U A A C G U C G U A A G U C A C U G C G U A C G U A A C G U A C G U A C G U A C U G

hsa-miR-551b* MIMAT0004794 Homo sapiens miR-551b* Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-15
Orientation:forward strand
Alignment:---------------CGATTT-
GGTCTCACCCACGCTTGATTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U
A C U G A C U G A C G U A G U C A C G U A G U C C G U A A G U C A G U C A G U C C G U A A G U C A C U G A G U C A C G U A C G U A C U G C G U A A C G U A C G U A C G U A G U C

hsa-miR-548ad MIMAT0018946 Homo sapiens miR-548ad Targets (miRBase)

Match Rank:10
Score:0.62
Offset:-15
Orientation:forward strand
Alignment:---------------CGATTT-
TGCAAAAGTCATTGTCGTTTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C U G C G U A A C G U A C G U A C G U A C G U
A C G U A C U G A G U C C G U A C G U A C G U A C G U A A C U G A C G U A G U C C G U A A C G U A C G U A C U G A C G U A G U C A C U G A C G U A C G U A C G U A C G U A G U C