Information for 20-TCCCCCTTSGTC (Motif 18)

A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
Reverse Opposite:
A T C G C T G A A G T C A T G C C T G A T C G A C T A G A T C G C T A G A C T G C A T G C G T A
p-value:1e-3
log p-value:-7.306e+00
Information Content per bp:1.756
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets67.6 +/- 39.2bp
Average Position of motif in Background108.0 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRSF1(RRM)/Homo_sapiens-RNCMPT00163-PBM/HughesRNA

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCCTTSGTC
CTCCTCC------
 A C G T A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
A T G C A C G T A G T C A G T C A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCCCCTTSGTC---
-CCCCCTTGGGCCCC
 A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C A C G T A C G T A C G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCCCCTTSGTC
TTCCCCT-----
 A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
C G A T A G C T A G T C A G T C A G T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

PF10_0068(RRM)/Plasmodium_falciparum-RNCMPT00199-PBM/HughesRNA

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCCTTSGTC
TTCCTCCN-----
 A C G T A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
A G C T A C G T A G T C A G T C G C A T A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

MSN4(MacIsaac)/Yeast

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCCCCCTTSGTC
-CCCCCTT----
 A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
A C G T A T G C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCCCCTTSGTC--
TCACCTCTGGGCAG
 A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCCTTSGTC
TTCCCCCTAC---
 A C G T A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

NCU02404(RRM)/Neurospora_crassa-RNCMPT00238-PBM/HughesRNA

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCCTTSGTC
TTCCTCC------
 A C G T A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
G A C T C G A T A G T C A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

RBM5(RRM)/Homo_sapiens-RNCMPT00154-PBM/HughesRNA

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCCCCTTSGTC
--CTCCTTC---
 A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C
A C G T A C G T A G T C A G C T A T G C A T G C A G C T A C G T A T G C A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCCCCTTSGTC-
TGCCCTGAGGGCA
 A C G T G A T C A G T C A G T C A T G C A G T C A G C T A G C T A T C G A C T G A G C T A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A